G929095


Basic Information

Item Value
gene id G929095
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 82096326 ~ 82098832 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057824
accctacaccctacagcacgccatcctcatagacctgggtgagaccctatactataccctacaccctacaccctacagcacgccatcctcatagacctgggtgagaccctatactatacactatacactacaccctacacactacaccctacacactacagcacgccatcctcatagacctgggtgagaccctatactatacactacaccctacacactacagcacgccatcctcatagacctgggtgagaccctatactatacactacaccctacaccctacaccctacagcacgccatcctcatagacctgggtgagaccctacaccctacagcacgccatcctcatagacctgggtgagaccctatactacaccctacaccctacacactatacactacacactacagcacgccatcctcatagacctgggtgagaccctatacta
>TU1057825
accctacaccctacagcacgccatcctcatagacctgggtgagaccctatactataccctacaccctacaccctacagcacgccatcctcatagacctgggtgagaccctatactatacactatacactacaccctacaccctacacactacacactatacactacacactacagcacgccatcctcatagacctgggtgagaccctatactatacactacacactacaccctacaccctacacactacaccctacagcacgccatcctcatagacctgggtgagaccctatactatacactatacactacaccct
>TU1057823
tacactatacactacaccctacaccctacacactacaccctacagcacgccatcctcatagacctgggtgagaccctatactacacactacacactacaccctacagcacgccatcctcatagacctgcgtgagaccctatactatacactacacactataccctacacactacaccctacacactacaccctacagcacgccatcctcatagacctgggtgagaccctatactatacactacacactacaccctacaccctacaccctacagcacgccatcctcatagacctgggtgagaccctatactatacactacacactacaccctacaccctacacactacagcacgccatcctcatagacctgggtgagaccctatactatacactacaccctacaccctacacactacaccc
>TU1057826
tacactatacactacaccctacaccctacacactacagcacgccatcctcatagacctgggtgagaccctatactatacactacaccctacaccctacagcacgccatcctcatagacctgggtgagaccctatactatacactacaccctacacactacagcacgccatcctcatagacctgggtgagaccctatactatacactacaccctacacactacagcacgccatcctcatagacctgggtgagaccctatactatacactacaccctacaccctacaccctacagcacgccatcctcatagacctgggtgagaccctatactatacactacacactacacactacaccctatacactacacactacagcacgccatcctcatagacctgggtgagaccctatacta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057824 False 449 lncRNA 0.52 3 82096326 82097580
TU1057825 False 316 lncRNA 0.50 2 82096326 82097828
TU1057823 False 420 lncRNA 0.50 2 82096642 82098221
TU1057826 True 414 lncRNA 0.50 2 82096642 82098832

Neighbor

gene id symbol gene type direction distance location
LOC118936823 pgm2 coding upstream 109892 81980794 ~ 81986434 (+)
LOC118936939 NA coding upstream 131501 81964084 ~ 81965938 (+)
LOC118936822 NA coding upstream 154039 81929145 ~ 81942287 (+)
LOC110515659 NA coding upstream 341329 81750222 ~ 81754997 (+)
LOC110514629 melk coding upstream 350481 81721230 ~ 81745845 (+)
LOC118936825 LOC106593007 coding downstream 74499 82173331 ~ 82211022 (+)
LOC110510824 LOC106594418 coding downstream 113616 82212448 ~ 82232976 (+)
LOC118936827 LOC106591767 coding downstream 162456 82261288 ~ 82306725 (+)
LOC118936828 wdr19 coding downstream 217889 82316721 ~ 82401240 (+)
LOC110512972 lias coding downstream 628583 82727415 ~ 82738670 (+)
G929072 NA non-coding upstream 3394 82013083 ~ 82092932 (+)
LOC118936694 tbc1d1 non-coding upstream 14188 81997421 ~ 82120937 (+)
G929087 NA non-coding upstream 45051 82050526 ~ 82051275 (+)
G929086 NA non-coding upstream 52380 82043670 ~ 82043946 (+)
G929084 NA non-coding upstream 54869 82040588 ~ 82041457 (+)
G929096 NA non-coding downstream 2868 82101700 ~ 82103252 (+)
G929099 NA non-coding downstream 19301 82118133 ~ 82118947 (+)
G929057 NA non-coding downstream 27261 82126093 ~ 82126901 (+)
G929101 NA non-coding downstream 30680 82129512 ~ 82129797 (+)
G929102 NA non-coding downstream 32178 82131010 ~ 82131240 (+)
G929033 NA other upstream 134813 81948110 ~ 81961513 (+)
LOC118936819 LOC106602658 other upstream 439818 81617460 ~ 81672338 (+)
G928929 NA other upstream 441935 81653391 ~ 81654391 (+)
LOC118936818 LOC106576580 other upstream 500574 81558744 ~ 81615329 (+)
G929113 NA other downstream 80954 82179786 ~ 82180426 (+)
G929159 NA other downstream 209971 82308803 ~ 82309572 (+)

Expression


Co-expression Network