G929057


Basic Information

Item Value
gene id G929057
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 82126093 ~ 82126901 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057772
agagagggacccttccccctaatggttgagggttaggtcatactatctgagaggagagagagaggcccttcCCCCTAATGGCCATGACTCCTGACTGTCCTTTCCGATTAGCAACACAATCTCCTGGTTGACACTGTAAAGCTGTTGCCATGACTCCTGACTGTCCTTTCCGATTAGCAACACAATATCCTGGTTGACACTGTAAAGCTGTTGCCATGACTCCTGACTGTCCTTTCCGATTAGCAACACAATATCCTGGTTGACACTGTAAAGCTGTTGCCATGACTCCTGACTGTCCTTTCCGATTAGCAACACAATCTCCTGGTTGACACTGTAAAGCTGTTGCCATGACTCCTGACTGTCCTTTCCGATTAGCAACACAATCTCCTGGTTGACACTGTAAAGCTGTTGCCATGACTCCTGACTGTCCTTTCCGATTAGCAACACAATCTCCTGGTTGACACTGTAAAGCTGTTGCCATGACTCCTGACTGTCCTTTCCACGTGATTTTTATATTTTAATTGATTGTTGTTGTCAttactctgttgttgttgttgttgtcattacgctgttgttgttgttgttattactctgttgttgttgtaattactctgttgttgttgttgtcattactctgttgttgttgtaattactctgttgttgttgttattactctgttgttgttgttgtcattactctgttgttgtcattattctgttgttgttgtcattattctgttgttgttgtcattattCTGTTGTTATTTCTCTATACTTTGAACAACAATACATTTCATATCCTTTGACTAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106563460

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057772 True 809 lncRNA 0.41 1 82126093 82126901

Neighbor

gene id symbol gene type direction distance location
LOC118936694 tbc1d1 coding upstream 5156 81997421 ~ 82120937 (+)
LOC118936823 pgm2 coding upstream 139659 81980794 ~ 81986434 (+)
LOC118936939 NA coding upstream 161268 81964084 ~ 81965938 (+)
LOC118936822 NA coding upstream 183806 81929145 ~ 81942287 (+)
LOC110515659 NA coding upstream 371096 81750222 ~ 81754997 (+)
LOC118936825 LOC106593007 coding downstream 46430 82173331 ~ 82211022 (+)
LOC110510824 LOC106594418 coding downstream 85547 82212448 ~ 82232976 (+)
LOC118936827 LOC106591767 coding downstream 134387 82261288 ~ 82306725 (+)
LOC118936828 wdr19 coding downstream 189820 82316721 ~ 82401240 (+)
LOC110512972 lias coding downstream 600514 82727415 ~ 82738670 (+)
G929099 NA non-coding upstream 7146 82118133 ~ 82118947 (+)
G929096 NA non-coding upstream 22841 82101700 ~ 82103252 (+)
G929095 NA non-coding upstream 27261 82096326 ~ 82098832 (+)
G929087 NA non-coding upstream 74818 82050526 ~ 82051275 (+)
G929101 NA non-coding downstream 2611 82129512 ~ 82129797 (+)
G929102 NA non-coding downstream 4109 82131010 ~ 82131240 (+)
G929103 NA non-coding downstream 4420 82131321 ~ 82131658 (+)
G929104 NA non-coding downstream 5647 82132548 ~ 82132806 (+)
G929107 NA non-coding downstream 32996 82159897 ~ 82160748 (+)
G929033 NA other upstream 164580 81948110 ~ 81961513 (+)
LOC110514629 melk other upstream 403252 81721230 ~ 81745845 (+)
LOC118936819 LOC106602658 other upstream 469585 81617460 ~ 81672338 (+)
G928929 NA other upstream 471702 81653391 ~ 81654391 (+)
LOC118936818 LOC106576580 other upstream 530341 81558744 ~ 81615329 (+)
G929113 NA other downstream 52885 82179786 ~ 82180426 (+)
G929159 NA other downstream 181902 82308803 ~ 82309572 (+)

Expression


Co-expression Network