Gene
RNA
| Item | Value |
|---|---|
| gene id | G929107 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 82159897 ~ 82160748 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1057841 | False | 327 | lncRNA | 0.52 | 2 | 82159897 | 82160748 |
| TU1057842 | True | 298 | lncRNA | 0.52 | 2 | 82160206 | 82160748 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936694 | tbc1d1 | coding | upstream | 38960 | 81997421 ~ 82120937 (+) |
| LOC118936823 | pgm2 | coding | upstream | 173463 | 81980794 ~ 81986434 (+) |
| LOC118936939 | NA | coding | upstream | 195072 | 81964084 ~ 81965938 (+) |
| LOC118936822 | NA | coding | upstream | 217610 | 81929145 ~ 81942287 (+) |
| LOC110515659 | NA | coding | upstream | 404900 | 81750222 ~ 81754997 (+) |
| LOC118936825 | LOC106593007 | coding | downstream | 12583 | 82173331 ~ 82211022 (+) |
| LOC110510824 | LOC106594418 | coding | downstream | 51700 | 82212448 ~ 82232976 (+) |
| LOC118936827 | LOC106591767 | coding | downstream | 100540 | 82261288 ~ 82306725 (+) |
| LOC118936828 | wdr19 | coding | downstream | 155973 | 82316721 ~ 82401240 (+) |
| LOC110512972 | lias | coding | downstream | 566667 | 82727415 ~ 82738670 (+) |
| G929104 | NA | non-coding | upstream | 27091 | 82132548 ~ 82132806 (+) |
| G929103 | NA | non-coding | upstream | 28239 | 82131321 ~ 82131658 (+) |
| G929102 | NA | non-coding | upstream | 28657 | 82131010 ~ 82131240 (+) |
| G929101 | NA | non-coding | upstream | 30100 | 82129512 ~ 82129797 (+) |
| G929057 | NA | non-coding | upstream | 32996 | 82126093 ~ 82126901 (+) |
| G929110 | NA | non-coding | downstream | 8179 | 82168927 ~ 82185577 (+) |
| G929117 | NA | non-coding | downstream | 27277 | 82188025 ~ 82190650 (+) |
| G929121 | NA | non-coding | downstream | 36344 | 82197092 ~ 82198233 (+) |
| G929127 | NA | non-coding | downstream | 42179 | 82202927 ~ 82203688 (+) |
| G929033 | NA | other | upstream | 198384 | 81948110 ~ 81961513 (+) |
| LOC110514629 | melk | other | upstream | 437056 | 81721230 ~ 81745845 (+) |
| LOC118936819 | LOC106602658 | other | upstream | 503389 | 81617460 ~ 81672338 (+) |
| G928929 | NA | other | upstream | 505506 | 81653391 ~ 81654391 (+) |
| LOC118936818 | LOC106576580 | other | upstream | 564145 | 81558744 ~ 81615329 (+) |
| G929113 | NA | other | downstream | 19038 | 82179786 ~ 82180426 (+) |
| G929159 | NA | other | downstream | 148055 | 82308803 ~ 82309572 (+) |
