G929121


Basic Information

Item Value
gene id G929121
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 82197092 ~ 82198233 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057861
tgatggtgtgtgagggtgtgatggtgtgtgtgatggtgtgggggtgtgtgtgagggtttttggctgtgatggtgtgtgtgagggtgtgtgtgtaacggtattcttcgtcctcctctgacgaggagtatgaaatgtgggaccaatgcgcagcgtggtatgtgttcatgatgtttatttTACTGAACACTgagaatacaaaataacaacgtgaaaataaacgaaaaccgaaacagtcctgaaaggtgcagaaaacactagaCAGAAAAaaaatcacccacaacccacaggtgggaaaaggctacctaagtatgattctcaatcagagacaacgaacgacacctgcctctgattgagaaccataccaggccaaacacataaacgcaacatagaaaaaagaacatagactacccaccccaactcacgccctgaccaaactaaaacaaagacataacaaag
>TU1057862
gtgtgagggtgtgatggtgtgtgtgtaacggtattcttcgtcctcctctgacgaggagtatgaaatgtgggaccaatgcgcagcgtggtatgtgttcatgatgtttatttTACTGAACACTgagaatacaaaataacaacgtgaaaataaacgaaaaccgaaacagtcctgaaaggtgcagaaaacactagaCAGAAAAaaaatcacccacaacccacaggtgggaaaaggctacctaagtatgattctcaatcagagacaacgaacgacacctgcctctgattgagaaccataccaggccaaacacataaacgcaacatagaaaaaagaacatagactacccaccccaactcacgccctgaccaaactaaaacaaagacataacaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057861 False 456 lncRNA 0.44 2 82197092 82198233
TU1057862 True 389 lncRNA 0.43 2 82197445 82198233

Neighbor

gene id symbol gene type direction distance location
LOC118936694 tbc1d1 coding upstream 76155 81997421 ~ 82120937 (+)
LOC118936823 pgm2 coding upstream 210658 81980794 ~ 81986434 (+)
LOC118936939 NA coding upstream 232267 81964084 ~ 81965938 (+)
LOC118936822 NA coding upstream 254805 81929145 ~ 81942287 (+)
LOC110515659 NA coding upstream 442095 81750222 ~ 81754997 (+)
LOC110510824 LOC106594418 coding downstream 14215 82212448 ~ 82232976 (+)
LOC118936827 LOC106591767 coding downstream 63055 82261288 ~ 82306725 (+)
LOC118936828 wdr19 coding downstream 118488 82316721 ~ 82401240 (+)
LOC110512972 lias coding downstream 529182 82727415 ~ 82738670 (+)
LOC118936830 NA coding downstream 542905 82740970 ~ 82780517 (+)
G929117 NA non-coding upstream 6442 82188025 ~ 82190650 (+)
G929110 NA non-coding upstream 11515 82168927 ~ 82185577 (+)
G929107 NA non-coding upstream 36344 82159897 ~ 82160748 (+)
G929104 NA non-coding upstream 64286 82132548 ~ 82132806 (+)
G929103 NA non-coding upstream 65434 82131321 ~ 82131658 (+)
G929127 NA non-coding downstream 4694 82202927 ~ 82203688 (+)
G929130 NA non-coding downstream 18346 82216579 ~ 82217229 (+)
G929131 NA non-coding downstream 22820 82221053 ~ 82226653 (+)
G929145 NA non-coding downstream 64692 82262925 ~ 82264031 (+)
G929154 NA non-coding downstream 90931 82289164 ~ 82290432 (+)
G929113 NA other upstream 16666 82179786 ~ 82180426 (+)
G929033 NA other upstream 235579 81948110 ~ 81961513 (+)
LOC110514629 melk other upstream 474251 81721230 ~ 81745845 (+)
LOC118936819 LOC106602658 other upstream 540584 81617460 ~ 81672338 (+)
G929159 NA other downstream 110570 82308803 ~ 82309572 (+)
G929305 NA other downstream 563372 82761605 ~ 82762488 (+)

Expression


Co-expression Network