G929145


Basic Information

Item Value
gene id G929145
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 82262925 ~ 82264031 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057926
AGATGGTCAGGACACTACTCtactggtacagcaggtagactagtcactagataAGATGGTCAGGACACtactggtacagcaggtagactagtcactagataAGATGGTCAGGACACtactCtactggtacagcaggtagactagtcactagataAGATGGTCGGGACACtactggtacagcaggtagactagtcactagatagatggtcaggacactactggtacagcaggtagactagtcactagataGATGGTCAGGACACTACTCtactggtacagcaggtagactagtcactagatagatggtcaggacactactggtacagccggtagactagtcactagatagatggtcaggacactactggtacagcaggtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057926 True 380 lncRNA 0.47 3 82262925 82264031

Neighbor

gene id symbol gene type direction distance location
LOC110510824 LOC106594418 coding upstream 29949 82212448 ~ 82232976 (+)
LOC118936825 LOC106593007 coding upstream 53591 82173331 ~ 82211022 (+)
LOC118936694 tbc1d1 coding upstream 141988 81997421 ~ 82120937 (+)
LOC118936823 pgm2 coding upstream 276491 81980794 ~ 81986434 (+)
LOC118936939 NA coding upstream 298100 81964084 ~ 81965938 (+)
LOC118936828 wdr19 coding downstream 52690 82316721 ~ 82401240 (+)
LOC110512972 lias coding downstream 463384 82727415 ~ 82738670 (+)
LOC118936830 NA coding downstream 477107 82740970 ~ 82780517 (+)
LOC118936832 LOC105009164 coding downstream 529622 82793509 ~ 82811450 (+)
LOC118936833 NA coding downstream 535888 82799919 ~ 82803172 (+)
G929131 NA non-coding upstream 36272 82221053 ~ 82226653 (+)
G929130 NA non-coding upstream 45696 82216579 ~ 82217229 (+)
G929154 NA non-coding downstream 25133 82289164 ~ 82290432 (+)
G929155 NA non-coding downstream 28538 82292569 ~ 82292988 (+)
LOC118936827 LOC106591767 non-coding downstream 29074 82261288 ~ 82306725 (+)
G929158 NA non-coding downstream 42027 82306058 ~ 82306489 (+)
G929162 NA non-coding downstream 50909 82314940 ~ 82316293 (+)
G929113 NA other upstream 82499 82179786 ~ 82180426 (+)
G929033 NA other upstream 301412 81948110 ~ 81961513 (+)
LOC110514629 melk other upstream 540084 81721230 ~ 81745845 (+)
G929159 NA other downstream 44772 82308803 ~ 82309572 (+)
G929305 NA other downstream 497574 82761605 ~ 82762488 (+)

Expression


Co-expression Network