G929158


Basic Information

Item Value
gene id G929158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 82306058 ~ 82306489 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057941
ctacacctgttgtattcagcatttcacagtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggttctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactatacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgt
>TU1057942
ctacacctgttgtattcagcatttcacagtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaggttctactacacctgttgtattcagcatttcactgtgaggttctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgt
>TU1057943
ctacacctgttgtattcagcatttcacagtgaggtctactacacctgttgtattcagcatttcactgtgaggttctactacacctgttgtattcagcatttcactgtgaggttctactacacctgttgtattcagcatttcactgtgaggttctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgt
>TU1057944
ctacacctgttgtattcagcatttcacagtgaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcggcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtgaggttctactacacctgttgtattcagcatttcactgtgaggttctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgt

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057941 False 356 lncRNA 0.42 2 82306058 82306489
TU1057942 False 243 lncRNA 0.42 3 82306058 82306489
TU1057943 False 244 lncRNA 0.42 3 82306058 82306489
TU1057944 True 319 lncRNA 0.42 2 82306058 82306489

Neighbor

gene id symbol gene type direction distance location
LOC110510824 LOC106594418 coding upstream 73082 82212448 ~ 82232976 (+)
LOC118936825 LOC106593007 coding upstream 96724 82173331 ~ 82211022 (+)
LOC118936694 tbc1d1 coding upstream 185121 81997421 ~ 82120937 (+)
LOC118936823 pgm2 coding upstream 319624 81980794 ~ 81986434 (+)
LOC118936939 NA coding upstream 341233 81964084 ~ 81965938 (+)
LOC118936828 wdr19 coding downstream 10232 82316721 ~ 82401240 (+)
LOC110512972 lias coding downstream 420926 82727415 ~ 82738670 (+)
LOC118936830 NA coding downstream 434649 82740970 ~ 82780517 (+)
LOC118936832 LOC105009164 coding downstream 487164 82793509 ~ 82811450 (+)
LOC118936833 NA coding downstream 493430 82799919 ~ 82803172 (+)
LOC118936827 LOC106591767 non-coding upstream 8730 82261288 ~ 82306725 (+)
G929155 NA non-coding upstream 13070 82292569 ~ 82292988 (+)
G929154 NA non-coding upstream 15626 82289164 ~ 82290432 (+)
G929145 NA non-coding upstream 42027 82262925 ~ 82264031 (+)
G929131 NA non-coding upstream 79405 82221053 ~ 82226653 (+)
G929162 NA non-coding downstream 8451 82314940 ~ 82316293 (+)
G929164 NA non-coding downstream 11589 82318078 ~ 82318701 (+)
G929139 NA non-coding downstream 62789 82369278 ~ 82369651 (+)
G929171 NA non-coding downstream 71682 82378171 ~ 82378466 (+)
G929172 NA non-coding downstream 79079 82385568 ~ 82386126 (+)
G929113 NA other upstream 125632 82179786 ~ 82180426 (+)
G929033 NA other upstream 344545 81948110 ~ 81961513 (+)
G929159 NA other downstream 2314 82308803 ~ 82309572 (+)
G929305 NA other downstream 455116 82761605 ~ 82762488 (+)
LOC110512617 n4bp2 other downstream 609307 82905730 ~ 82956331 (+)

Expression


Co-expression Network