G929162


Basic Information

Item Value
gene id G929162
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 82314940 ~ 82316293 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057952
ctagtacccctggacattgactcagtactggtaccccgtgtatatagctaagttattacctagtacccctgtatgtgactcagtactggtaccctgtgtatatagctaagttattacctagtacccctgcatatgactcagtactggtactctgtgtatatagctaagttattacctagtacccctgtatatggctctgtactggtaccctgtgtatatagccatgttattacctcgtacccctgtatatggctctgtactggtaccctgtgtatatagccaagttattacctagtatatgactcagtactggtactctgtgtatatagccatgttattacctagtacccctggacattgactcagtactggtaccccgtgtatatagctaagttattacctagtacccctggacattgactcagtactggtgccctgtgtatatagccatgttattacctagtacccctgcatatgactcagtactggtaccccgtgtatatagccatgttattacctagtacccctgtatatggctctgtactggtaccctgtgtatatagccatgttattacctcgtacccctgtatatggctctgtactggtaccctgtgtatatagccatgttattacctagtacatgactcagtactggtaccctgtgtatatagccatgtttttacctagtacccctgtatatatagctaagttattacctcgtacccctgtatatggctctgtactggtaccctgtgtatatagccaagttattacctagTATATGACTCAGTAcaggtaccctgtgtatatagccatgttattacctagtatatgactcagtactggtaccctgtgtatacagccatgttatccttactcattgtgtattataACTTGTAGTATTATTTTTCtaatttctttctctctgcattgttgtccACATATCAACATTTT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057952 True 954 lncRNA 0.41 3 82314940 82316293

Neighbor

gene id symbol gene type direction distance location
LOC118936827 LOC106591767 coding upstream 8215 82261288 ~ 82306725 (+)
LOC110510824 LOC106594418 coding upstream 81964 82212448 ~ 82232976 (+)
LOC118936825 LOC106593007 coding upstream 105606 82173331 ~ 82211022 (+)
LOC118936694 tbc1d1 coding upstream 194003 81997421 ~ 82120937 (+)
LOC118936823 pgm2 coding upstream 328506 81980794 ~ 81986434 (+)
LOC118936828 wdr19 coding downstream 428 82316721 ~ 82401240 (+)
LOC110512972 lias coding downstream 411122 82727415 ~ 82738670 (+)
LOC118936830 NA coding downstream 424845 82740970 ~ 82780517 (+)
LOC118936832 LOC105009164 coding downstream 477360 82793509 ~ 82811450 (+)
LOC118936833 NA coding downstream 483626 82799919 ~ 82803172 (+)
G929158 NA non-coding upstream 8451 82306058 ~ 82306489 (+)
G929155 NA non-coding upstream 21952 82292569 ~ 82292988 (+)
G929154 NA non-coding upstream 24508 82289164 ~ 82290432 (+)
G929145 NA non-coding upstream 50909 82262925 ~ 82264031 (+)
G929164 NA non-coding downstream 1785 82318078 ~ 82318701 (+)
G929139 NA non-coding downstream 52985 82369278 ~ 82369651 (+)
G929171 NA non-coding downstream 61878 82378171 ~ 82378466 (+)
G929172 NA non-coding downstream 69275 82385568 ~ 82386126 (+)
G929182 NA non-coding downstream 95712 82412005 ~ 82412680 (+)
G929159 NA other upstream 5368 82308803 ~ 82309572 (+)
G929113 NA other upstream 134514 82179786 ~ 82180426 (+)
G929305 NA other downstream 445312 82761605 ~ 82762488 (+)
LOC110512617 n4bp2 other downstream 599503 82905730 ~ 82956331 (+)
G929370 NA other downstream 718819 83035112 ~ 83035491 (+)

Expression


Co-expression Network