Gene
RNA
| Item | Value |
|---|---|
| gene id | G929172 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 82385568 ~ 82386126 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein lin-10 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1057962 | True | 262 | lncRNA | 0.48 | 2 | 82385568 | 82386126 |
82,383,200
82,383,600
82,384,000
82,384,400
82,384,800
82,385,200
82,385,600
82,385,600
82,386,000
82,386,400
82,386,800
82,387,200
82,387,600
82,388,000
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936827 | LOC106591767 | coding | upstream | 78843 | 82261288 ~ 82306725 (+) |
| LOC110510824 | LOC106594418 | coding | upstream | 152592 | 82212448 ~ 82232976 (+) |
| LOC118936825 | LOC106593007 | coding | upstream | 176234 | 82173331 ~ 82211022 (+) |
| LOC118936694 | tbc1d1 | coding | upstream | 264631 | 81997421 ~ 82120937 (+) |
| LOC118936823 | pgm2 | coding | upstream | 399134 | 81980794 ~ 81986434 (+) |
| LOC110512972 | lias | coding | downstream | 341289 | 82727415 ~ 82738670 (+) |
| LOC118936830 | NA | coding | downstream | 355012 | 82740970 ~ 82780517 (+) |
| LOC118936832 | LOC105009164 | coding | downstream | 407527 | 82793509 ~ 82811450 (+) |
| LOC118936833 | NA | coding | downstream | 413793 | 82799919 ~ 82803172 (+) |
| LOC110512617 | n4bp2 | coding | downstream | 519604 | 82905730 ~ 82956331 (+) |
| G929171 | NA | non-coding | upstream | 7102 | 82378171 ~ 82378466 (+) |
| G929139 | NA | non-coding | upstream | 15917 | 82369278 ~ 82369651 (+) |
| G929164 | NA | non-coding | upstream | 66867 | 82318078 ~ 82318701 (+) |
| G929162 | NA | non-coding | upstream | 69275 | 82314940 ~ 82316293 (+) |
| G929158 | NA | non-coding | upstream | 79079 | 82306058 ~ 82306489 (+) |
| G929182 | NA | non-coding | downstream | 25879 | 82412005 ~ 82412680 (+) |
| G929184 | NA | non-coding | downstream | 29104 | 82415230 ~ 82419615 (+) |
| G929186 | NA | non-coding | downstream | 31084 | 82417210 ~ 82419498 (+) |
| G929195 | NA | non-coding | downstream | 59068 | 82445194 ~ 82445612 (+) |
| G929200 | NA | non-coding | downstream | 72802 | 82458928 ~ 82562957 (+) |
| G929159 | NA | other | upstream | 75996 | 82308803 ~ 82309572 (+) |
| G929305 | NA | other | downstream | 375479 | 82761605 ~ 82762488 (+) |
| G929370 | NA | other | downstream | 648986 | 83035112 ~ 83035491 (+) |
