Gene
RNA
| Item | Value |
|---|---|
| gene id | G929278 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 82689742 ~ 82689978 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| replication factor C subunit 1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1058131 | True | 237 | lncRNA | 0.49 | 1 | 82689742 | 82689978 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936828 | wdr19 | coding | upstream | 288502 | 82316721 ~ 82401240 (+) |
| LOC118936827 | LOC106591767 | coding | upstream | 383017 | 82261288 ~ 82306725 (+) |
| LOC110510824 | LOC106594418 | coding | upstream | 456766 | 82212448 ~ 82232976 (+) |
| LOC118936825 | LOC106593007 | coding | upstream | 480408 | 82173331 ~ 82211022 (+) |
| LOC118936694 | tbc1d1 | coding | upstream | 568805 | 81997421 ~ 82120937 (+) |
| LOC110512972 | lias | coding | downstream | 37437 | 82727415 ~ 82738670 (+) |
| LOC118936830 | NA | coding | downstream | 51160 | 82740970 ~ 82780517 (+) |
| LOC118936832 | LOC105009164 | coding | downstream | 103675 | 82793509 ~ 82811450 (+) |
| LOC118936833 | NA | coding | downstream | 109941 | 82799919 ~ 82803172 (+) |
| LOC110512617 | n4bp2 | coding | downstream | 215752 | 82905730 ~ 82956331 (+) |
| G929277 | NA | non-coding | upstream | 55 | 82689474 ~ 82689687 (+) |
| G929276 | NA | non-coding | upstream | 5378 | 82684141 ~ 82684364 (+) |
| G929274 | NA | non-coding | upstream | 6741 | 82681707 ~ 82683001 (+) |
| G929273 | NA | non-coding | upstream | 53690 | 82634709 ~ 82636052 (+) |
| G929247 | NA | non-coding | upstream | 71066 | 82604732 ~ 82618676 (+) |
| G929282 | rfc1 | non-coding | downstream | 7655 | 82697633 ~ 82698012 (+) |
| G929284 | rfc1 | non-coding | downstream | 8533 | 82698511 ~ 82715829 (+) |
| G929287 | NA | non-coding | downstream | 14970 | 82704948 ~ 82707391 (+) |
| G929294 | NA | non-coding | downstream | 27830 | 82717808 ~ 82718305 (+) |
| G929257 | rpl9 | non-coding | downstream | 29541 | 82719519 ~ 82815785 (+) |
| G929159 | NA | other | upstream | 380170 | 82308803 ~ 82309572 (+) |
| G929305 | NA | other | downstream | 71627 | 82761605 ~ 82762488 (+) |
| G929370 | NA | other | downstream | 345134 | 83035112 ~ 83035491 (+) |
