G929294


Basic Information

Item Value
gene id G929294
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 82717808 ~ 82718305 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1058148
CAAAACTTTATTTAATTCATATGGCCTTTTTACAACGTTTGCACGCGTGTCTACAGACCCCTTTTGACGCAGGTACAAAGCTGTGTGTTAAGATAATTTTTTCTTCAAAATATTTTTCGATTTTGTATTTTATGTAATAACGAGGGAAGTCTATGTTAGCTGTGTAAATGTTGTATGTACGAATGTGAACGGTCCGAACGACTCAGACGTTGACAACTATAGACAGACCTGCAGTTTGAAGACCTGCCACCACTCTCACCTCTTTCCCACGACCAGGAAAGGACCGTGACGACCAGAGATATCCTATTACCCAGAAACACACACGTACCTACCAGTCCCTGTTCTAAGGTGACACTGAGACTTGAACACTGATGGGATCCTTGTATTGTTTTCACAGGATTCTTA
>TU1058150
CAAAACTTTATTTAATTCATATGGCCTTTTTACAACGTTTGCACGCGTGTCTACAGACCCCTTTTGACGCAGGTACAAAGCTGTGTGTTAAGATAATTTTTTCTTCAAAATATTTTTCGATTTTGTATTTTATGTAATAACGAGGGAAGTCTATGTTAGCTGTGTAAATGTTGTATGTACGAATGTGAACGGTCCGAACGACTCAGACGTTGACAACTATAGACAGACCTGCAGTTTGAAGACCTGCCACCACTCTCACCTCTTTCCCACGACCAGGAAAGGACCGTGACGACCAGAGATATCCTATTACCCAGAAACACACACGTACCTACCAGTCCCTGTTCTAAGGTGACACTGAGACTTGAACACTGATGGGATCCTTGTATTGTTTTCACAGGATTCTTACTTTTGGTCAGCTTTCGAAAACACTTTGCAGATCTTTCTGACACACGACTAATATCCAAACGCTCTGTAACATTGCAGCCCTCTGAACAgacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1058148 False 405 lncRNA 0.41 1 82717808 82718212
TU1058150 True 498 lncRNA 0.42 1 82717808 82718305

Neighbor

gene id symbol gene type direction distance location
LOC118936828 wdr19 coding upstream 316568 82316721 ~ 82401240 (+)
LOC118936827 LOC106591767 coding upstream 411083 82261288 ~ 82306725 (+)
LOC110510824 LOC106594418 coding upstream 484832 82212448 ~ 82232976 (+)
LOC118936825 LOC106593007 coding upstream 508474 82173331 ~ 82211022 (+)
LOC118936694 tbc1d1 coding upstream 596871 81997421 ~ 82120937 (+)
LOC110512972 lias coding downstream 9110 82727415 ~ 82738670 (+)
LOC118936830 NA coding downstream 22833 82740970 ~ 82780517 (+)
LOC118936832 LOC105009164 coding downstream 75348 82793509 ~ 82811450 (+)
LOC118936833 NA coding downstream 81614 82799919 ~ 82803172 (+)
LOC110512617 n4bp2 coding downstream 187425 82905730 ~ 82956331 (+)
G929284 rfc1 non-coding upstream 1979 82698511 ~ 82715829 (+)
G929287 NA non-coding upstream 10417 82704948 ~ 82707391 (+)
G929282 rfc1 non-coding upstream 19796 82697633 ~ 82698012 (+)
G929278 NA non-coding upstream 27830 82689742 ~ 82689978 (+)
G929277 NA non-coding upstream 28121 82689474 ~ 82689687 (+)
G929257 rpl9 non-coding downstream 1214 82719519 ~ 82815785 (+)
G929258 NA non-coding downstream 20433 82738738 ~ 82739793 (+)
G929302 NA non-coding downstream 30583 82748888 ~ 82749196 (+)
G929304 NA non-coding downstream 42186 82760491 ~ 82761057 (+)
G929159 NA other upstream 408236 82308803 ~ 82309572 (+)
G929305 NA other downstream 43300 82761605 ~ 82762488 (+)
G929370 NA other downstream 316807 83035112 ~ 83035491 (+)

Expression


Co-expression Network