G929258


Basic Information

Item Value
gene id G929258
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 82738738 ~ 82739793 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1058099
GGGAAGATAAAGGGGGGTAAATATCTGGGAATATAAAGGGGGGTAAATACCTGGGAAGATAAAGGGGGGCAGTAATTGCCTGGGAAGATAAAGGGGGGCAGTAATTGCCTGGGAAGATAAAGGGGGGTCGACCTCCACTCCACCACTGGCTATAGATGTATGATTCATATCAGTCagcaacacacacattcacacagtcaACCTGAGTCGACCAACGCATCAGGAGGGCAGAGggggacaacacaacacaataattTGATTATTGACATGATACTCGGATGAGAGAGAATGACTTGAGGGGTTTGAAATGTGTTGCTATGTGATCAGTGTGTTGCTATGTGACTTGGAGTGTTGTTTTATAATGACTCACGGCTGTACATTAAAAGTATTAAATCATGA
>TU1058106
GGGAAGATAAAGGGGGGTAAATATCTGGGAATATAAAGGGGGGTAAATACCTGGGAAGATAAAGGGGGGCAGTAATTGCCTGGGAAGATAAAGGGGGGCAGTAATTGCCTGGGAAGATAAAGGGGGGGGAGTAATTGCCTGGGAAGATAAAGGGGGGGTCGACCTCCACTCCACCACTGGCTATAGATGTATGATTCATATCAGTCagcaacacacacattcacacagtcaACCTGAGTCGACCAACGCATCAGGAGGGCAGAGggggacaacacaacacaataattTGATTATTGACATGATACTCGGATGAGAGAGAATGACTTGAGGGGTTTGAAATGTGTTGCTATGTGATCAGTGTGTTGCTATGTGACTTGGAGTGTTGTTTTATAATGACTCACGGCTGTACATTAAAAGTATTAAATCATGA
>TU1058104
AGGGGGGTAAATACCTGGGAAGATAAAGGGGGGCAGTAATTGCCTGGGAAGATAAAGGGGGGCAGTAATTGCCTGGGAAGATAAAGGGGGGTCGACCTCCACTCCACCACTGGCTATAGATGTATGATTCATATCAGTCagcaacacacacattcacacagtcaACCTGAGTCGACCAACGCATCAGGAGGGCAGAGggggacaacacaacacaataattTGATTATTGACATGATACTCGGATGAGAGAGAATGACTTGAGGGGTTTGAAATGTGTTGCTATGTGATCAGTGTGTTGCTATGTGACTTGGAGTGTTGTTTTATAATGACTCACGGCTGTACATTAAAAGTATTAAATCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1058099 False 399 lncRNA 0.44 3 82738738 82739793
TU1058106 False 430 lncRNA 0.45 3 82738738 82739793
TU1058104 True 363 lncRNA 0.45 2 82739135 82739793

Neighbor

gene id symbol gene type direction distance location
LOC110512972 lias coding upstream 68 82727415 ~ 82738670 (+)
LOC118936828 wdr19 coding upstream 337498 82316721 ~ 82401240 (+)
LOC118936827 LOC106591767 coding upstream 432013 82261288 ~ 82306725 (+)
LOC110510824 LOC106594418 coding upstream 505762 82212448 ~ 82232976 (+)
LOC118936825 LOC106593007 coding upstream 529404 82173331 ~ 82211022 (+)
LOC118936830 NA coding downstream 1345 82740970 ~ 82780517 (+)
LOC118936832 LOC105009164 coding downstream 53860 82793509 ~ 82811450 (+)
LOC118936833 NA coding downstream 60126 82799919 ~ 82803172 (+)
LOC110512617 n4bp2 coding downstream 165937 82905730 ~ 82956331 (+)
LOC110515053 rhoh coding downstream 221278 82961071 ~ 82976330 (+)
G929294 NA non-coding upstream 20433 82717808 ~ 82718305 (+)
G929284 rfc1 non-coding upstream 22909 82698511 ~ 82715829 (+)
G929287 NA non-coding upstream 31347 82704948 ~ 82707391 (+)
G929282 rfc1 non-coding upstream 40726 82697633 ~ 82698012 (+)
G929278 NA non-coding upstream 48760 82689742 ~ 82689978 (+)
G929302 NA non-coding downstream 9095 82748888 ~ 82749196 (+)
G929304 NA non-coding downstream 20698 82760491 ~ 82761057 (+)
G929306 NA non-coding downstream 24964 82764757 ~ 82765033 (+)
G929307 NA non-coding downstream 27233 82767026 ~ 82767410 (+)
G929159 NA other upstream 429166 82308803 ~ 82309572 (+)
G929305 NA other downstream 21812 82761605 ~ 82762488 (+)
G929370 NA other downstream 295319 83035112 ~ 83035491 (+)

Expression


Co-expression Network