XLOC_002826 (cltca)


Basic Information

Item Value
gene id XLOC_002826
gene name cltca
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 28311031 ~ 28368913 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005239
GAGTTCCTCTCAGCGGCGGTTGACATTCTGGAGTTGAAGCGCCTCATTTATATTCAACGGGCGACTAGAGAAACCTAACACATTCCCGGTTCATCTGCCCCCTCCCCAAAAAAACACCAGACCACCTCCATTCATCCCCGGCTCTGGAGTAGTTTAGATAAGGCAGAACTAATAGCAGGAATTAGAGAGCAAATCGAAGAGgaaccaccaccaccatcatGGCTCAAATCCTGCCCATCAGATTCCAGGAGCACCTGCAGCTCCAAAATTTGGGGATCAACCCAGCCAACATTGGGTTCAGCACCCTGACAATGGAATCGGATAAGTTCATCTGTGTCCGGGAGAAGGTTGGAGAACAGGCGCAGGTGGTGATCATTGATATGGCGGACCCAAACACCCCCATCCGCAGGCCCATCTCTGCAGATAGTGCCATCATGAACCCTGCGAGCAAAGTCATTGCCCTCAAAGCTGCCAAAACCCTTCAGATCTTTAATATCGAGATGAAGAGTAAGATGAAAGCCCACACCATGACCGATGACGTTACTTTCTGGAAGTGGATCTCCCTCAACACTGTTGCCCTCGTGACCGATAACGCCGTCTATCATTGGAGCATGGAGGGAGACTCTCAGCCGGTCAAAGTGTTTGACAGACATTCCAGTCTGGCAGGCTGTCAAATCATCAACTACCGCACTGATGCCAAGCAGAAGTGGCTGCTGCTCATTGGCATTTCTGCTCAGCAAAACAGAGTTGTTGGAGCCATGCAGCTCTACTCTGTTGATAGGAAGGTGTCACAGCCTATTGAGGGGCACGCCGCTGGCTTTGGTCAATTCAAAATGGAGGGAAACACTGAAGAATCCACTCTCTTCTGTTTCGCTGTGCGAGGTCAGGCAGGCGGAAAGctTCACATTATTGAAGTGGGCACACCACCAACAGGCAACCAGCAATTCCCAAAGAAAGCCGTGGATGTGTTCTTCCCACCAGAAGCACAGAATGACTTCCCTGTAGCCATGCAgATCAGCTCCAAACATGATGTTGTGTATCTCATCACTAAATATGGCTACATTCATCTGTATGACCTGGAGACGGGCACCTGCATCTACATGAACCGAATCAGCGGGGAGACCATTTTTGTGACTGCGCCCCATGATGCCACAGCTGGGATTATCGGCGTCAACAGGAAAGGACAGGTGTTGTCAGTGTGTGTTGAGGAGGAAAACATCATCCAGTACATTACCAATGTGCTGCAGAATCCAGACCTGGCTTTACGGATGGCAGTCCGCAATAATCTGGCTGGAGCTGAGGAGCTGTTCGGACGCAAGTTTAACAACCTCTTTGCCGGTGGAAATTTTGCAGAGGCAGCTAAAGTAGCTGCTAATGCTCCAAAGGGTATCCTGCGCACCCCTGACACCATACGCCGGTTCCAGAGTGTCCCGGCTCAACCAGGCCAGACGTCCCCACTGCTGCAGTATTTTGGGATCCTCCTGGACCAGGGCCAGCTCAACAAGTTTGAGTCTTTGGAGCTCTGCAGACCCGTCCTTCAGCAGGGCCGCAAACAACTGCTGGAGAAATGGCTGAAGGAGGACAAGCTTGAATGCTCAGAGGAGCTGGGTGACCTGGTGAAGTCTGTGGACCCGACTCTTGCTCTCAGCGTCTATCTGAGGGCCAACGTACCCAACAAAGTCATTCAGTGTTTTGCAGAAACTGGCCAGTTCCCTAAGATTGTCCTGTACGCCAAAAAGGTGGGCTACACTCCAGACTGGATCTTCCTGCTGAGGAACGTGATGCGGATCAGTCCAGATCAGGGTCTGCAGTTTGCTCAGATGCTTGTTCAGGACGAGGAACCGCTGGCTGACATCACACAGATCGTTGATGTGTTTATGGAGTATAACCTGGTCCAGCAGTGCACTTCCTTCCTTTTAGATGCTTTGAAGAACAACCGGCCATCAGAAGGACCACTGCAGACCCGTCTGCTGGAGATGAACCTGATGCACGCACCACAGGTTGCAGATGCCATCCTAGGAAACCAGATGTTCACCAACTACGATCGTGCCCACATCGCCCAACTGTGTGAGAAAGCAGGACTTCTTCAGAGAGCTTTAGAGCATTACACCGACTTGTATGACATCAAACGAGCTGTCGTGCACACACACCTGCTCAACCCGGAGtGGCTGGTCAACTACTTTGGCTCTCTGTCAGTGGAGGACTCTCTGGAGTGTCTGAGGGCCATGCTGTCTGCTAACATCAGACAGAATCTCCAGATCTGCGTCCAGGTGGCGTCCAAGTATCACGAGCAGCTGAGCACACAGTCCCTCACCGAGCTCTTTGAGTCGTTCAAGAGTTTTGAGGGCCTTTTCTACTTTCTTGGCTCAATCGTAAACTTCAGCCAGGACCCAGAGGTGCATTTCAAATACATCCAGGCCGCATGCAAGACGGGCCAAATCAAAGAGGTGGAGCGCATCTGTCGGGAAAGCAACTGCTACAACCCTGAACGTGTCAAGAACTTTCTCAAGGAAGCTAAACTCACTGACCAGCTGCCTCTCATTATTGTGTGCGATCGCTTCGACTTCGTCCACGACCTTGTTCTTTACCTGTACAGAAACAACCTGCAGAAGTACATCGAAATCTACGTCCAGAAGGTAAACCCAAGCCGTCTGCCTGTGGTGATTGGAGGTCTGCTGGATGTGGACTGCTCTGAGGATGTCATCAAAAACCTGATCCTGGTTGTACGGGGACAGTTTTCCACCGATGAGCTGGTGGCAGAAGTGGAGAAGAGAAACAGACTGAAGCTGTTGTTGCCCTGGCTGGAGTCTCGTATCCACGAGGGCTGTGAGGAGCCAGCTACCCACAATGCCCTGGCCAAGATCTACATCGACAGCAACAACAACCCTGAACGCTTCCTGCGGGAGAACCCATACTACGATAGCCGCGTGGTGGGGAAATACTGCGAAAAACGAGACCCTCATCTGGCCTGTGTGGCCTATGAGAGAGGAACGTGTGACCAGGAGCTGATCAACGTTTGCAATGAGAACTCGCTGTTCAAGAGTTTGTCCCGCTATCTGGTGCGCCGCAGGGACCCTGAGCTATGGGCCAGTGTGCTTCTGGAGACCAACCCCTTCAGGAGGCCCCTTATTGACCAGGTGGTGCAGACAGCCCTGTCAGAGACTCAGGACCCAGAGGAGGTGTCAGTCACAGTGAAGGCCTTCATGACTGCTGACCTGCCCAATGAACTCATTGAGCTGCTGGAAAAGATTGTCCTGGACAACTCCGTCTTCAGTGAACACAGAAACCTGCAGAACCTGCTCATCCTAACAGCCATCAAAGCTGACCGTACTCGGGTCATGGAGTACATCAACCGCCTGGACAACTACGATGCCCCAGACATCGCCAACATCGCCATCAGCAGCGAGCTGTTTGAGGAGGCCTTCGCCATCTTCAAGAAATTCGATGTCAACACCTCTGCAGTGCAGGTTCTGATCGAGCACATTGGTAATCTGGACCGGGCCTATGAGTTTGCGGAGCGCTGCAATGAACCTGCGGTGTGGAGTCAACTGGCCAAGGCTCAGCTTCAGAAGGGTCTCGTCAAAGAGTCCATCGACTCCTACATCAAAGCTGATGATCCTTCAGCTTACATGGAAGTGGTCCAAGCTGCTGACCAAAGTGGAAACTGGGAGGACCTGGTGAAGTTTTTGCAGATGGCCAGAAAGAAGGCCAGAGAGTCTTACGTGGAGACTGAGCTGATCTTCGCTCTGGCCAAAACCAACCGTCTCGCTGAACTGGAGGAGTTTATCAATGGACCAAATAATGCACACATCCAGCAGGTTGGAGATCGCTGCTATGATGAGAAGATGTACGAGGCGGCCAAACTTCTCTACAATAACGTCTCCAACTTCGGCCGCTTGGCTTCCACTCTGGTCCACTTGGGCGAGTATCAAGCCGCTGTCGATGGTGCCCGCAAGGCCAACAGCACTCGCACATGGAAAGAGGTTTGCTTTGCCTGTGTGGATGGAAAGGAGTTCAGATTGGCTCAAATGTGCGGCCTTCATATCGTGGTTCACGCAGATGAATTGGAAGAGCTCATCAACTACTATCAGgACCGTGGCTACTTTGAGGAGCTGATCACCATGCTGGAAGCGGCGCTGGGGTTGGAGCGCGCTCATATGGGCATGTTCACAGAGCTCGCCATCCTCTACTCCAAATTCAAGCCACAGAAGATGAGGGAGCACCTGGAGCTCTTCTGGTCCAGAGTCAACATCCCAAAGGTTTTGAGGGCTGCAGAGCAGGCTCACCTGTGGGCAGAACTGGTTTTCCTGTACGACAAGTATGAAGAGTTTGATAACGCCATCATCACCATGATGAGCCATCCCACAGACGCCTGGAAAGAGGGACAGTTCAAGGACATCATCACCAAGGTGGCCAATGTGGAACTGTACTACAAAGCCATCCAGTTTTATCTGGAATTCAGGCCCTTGTTACTGAACGACCTGCTCATAGTTCTTTCTCCAAGACTCGATCACTCGCGAGCCGTCAACTTCTTCAGCAagGTTAAGCAGCTTCCTCTGGTCAAGCCTTACCTGCGGTCAGTACAAAACCACAACAACAAGTCAGTCAATGAAGCACTTAACAACCTCTTCATCTCAGAGGAGGACTATCAGGCCCTCAGGACGTCCATAGACGCGTACGATAACTTCGACAACATCTCTCTGGCTCAGCGTCTGGAGAAACACGAGTTAATTGAGTTCAGGAGAATCGCTGCTTACCTCTTCAAGGGGAACAACCGCTGGAAGCAGAGCGTGGAGCTGTGCAAGAAAGACAAGCTCTACAAGgATGCCATGCAATATGCATCGGAGTCAAAGGACACAGAGCTGGCCGAGGAGCTGCTGCAGTGGTTCCTGGATGAGAATAAGAAGGAGTGTTTTGCCGCCTGCCTCTTCACCTGCTACGATCTGCTCCGGCCTGACGTGGTGCTGGAGACATCCTGGAGGAACAACATCATGGACTTCGCCATGCCGTACTTCATCCAGGTCATGAGGGAATACCTCAGCAAGGTGGACAAGCTAGAGACCTCTGAGTCCTTGAGGAAAGAGGAGGAGCAAGCGACAGAAACTCAACCAATTGTTTATGGCACACCCCAGCTCATGCTGACAGCAGGCCCCAGTGTGCCCGTCCCACCACAGCAGGGGTATGGCTATGGTTACACAGCAGCTCCTGGTTATCCCCCTCAGGCTCCTCAGGCCCAGCCGGGCTTCGGTTATGGCATGTAAAGAGCTCCCCGTCTCCCGCTCGCCTCTCTTCCTGCTGCCGCTTGGTTCGGTCCAGCAAACCCCATGGATCTCCCTCAGTCCTCCACCAGTCCGACTCTACCACTTTGTGCTCACGACGGGGGATTTGAGCAAATGTCATTCTTTTACTTtaccttttgtttattttttttttaaatgatcgtTTTTGTTTATCGTGTTTTCTTTATACCATCATGAAGGACTTTATTTCTATGTTGTCAAAGATTTCATTGCGAGTAATTTTTTGTCACATTCCAGATGTCTACTAGAGTTAATTTCTTGTCAGTTTTATCTGTCAGTTTAAAGGGGAAGGGCGTCTGTGTTGAGGAGACTTGTGGGAAAATAGCAAGTCAGCAGCTTCATTAAAAATGACTAAACAAAATCTGATTTGCACTCCGTGGTCTGAGAAAAACAACTAATGTAtcatttctctgtgtgtgtgtgtgagcaactTGTTCAGTCCGTCTGCATTTATCTATTGTATATTCCaggaaacagaaaataaaatggaGGAAACTGTTTGACTGCCGCCTCCACAAACAAACACTACTCGATACCAGTAATTCAGTGGGGGGGTGAGTAGCAattaatatatgtttaaaaagGGTTGTTTAAATGCGTTACGACACGTTCAAGTTGACCTATGCAGGTTTTCCGGTTCCTCTGTTTTTCCACAAACTTTTGTTGTGCAGTAACCCGTGCTCATTGTCTGGGACCATCCATTTAAAGGAGGGatgatgattaaaatatataaatatatatagaaatatatacgCGGCTCTCCACACCTCTGTGTGTTTTACTAACCTGACCTCTCTGTGctgcagtgtgtatgtgtgtgtatgctggTTGTTGTGATGTTTCAGTCACTGTATGGCATCGAAGTGAGACTAGAGAAAGCCAGTTGATCCTGCCAGTTATTCCTAAACTCAAGAGTTTACCCTTTATTTGTAAAGAAGAGAAATCACCAATTGGGTTTATGAAGATTTAAACTAACTtccgtgtgtgtgcgcgtgtgtccTGTACTCGGTTTTCACTGAGTTGAGATTAATCATACATGTACACTTCTATTGTAGTGATCTGATTGTGCACAAAGAGAATGAGACTTCTTTCTTCCCCTCCAGATTACCATAAAAATAAAGGCTTCTTGTTTGTCAAGAAAAA
>TCONS_00005240
atGGCTCAAATCCTGCCCATCAGATTCCAGGAGCACCTGCAGCTCCAAAATTTGGGGATCAACCCAGCCAACATTGGGTTCAGCACCCTGACAATGGAATCGGATAAGTTCATCTGTGTCCGGGAGAAGGTTGGAGAACAGGCGCAGGTGGTGATCATTGATATGGCGGACCCAAACACCCCCATCCGCAGGCCCATCTCTGCAGATAGTGCCATCATGAACCCTGCGAGCAAAGTCATTGCCCTCAAAGCTGCCAAAACCCTTCAGATCTTTAATATCGAGATGAAGAGTAAGATGAAAGCCCACACCATGACCGATGACGTTACTTTCTGGAAGTGGATCTCCCTCAACACTGTTGCCCTCGTGACCGATAACGCCGTCTATCATTGGAGCATGGAGGGAGACTCTCAGCCGGTCAAAGTGTTTGACAGACATTCCAGTCTGGCAGGCTGTCAAATCATCAACTACCGCACTGATGCCAAGCAGAAGTGGCTGCTGCTCATTGGCATTTCTGCTCAGCAAAACAGAGTTGTTGGAGCCATGCAGCTCTACTCTGTTGATAGGAAGGTGTCACAGCCTATTGAGGGGCACGCCGCTGGCTTTGGTCAATTCAAAATGGAGGGAAACACTGAAGAATCCACTCTCTTCTGTTTCGCTGTGCGAGGTCAGGCAGGCGGAAAGctTCACATTATTGAAGTGGGCACACCACCAACAGGCAACCAGCAATTCCCAAAGAAAGCCGTGGATGTGTTCTTCCCACCAGAAGCACAGAATGACTTCCCTGTAGCCATGCAgATCAGCTCCAAACATGATGTTGTGTATCTCATCACTAAATATGGCTACATTCATCTGTATGACCTGGAGACGGGCACCTGCATCTACATGAACCGAATCAGCGGGGAGACCATTTTTGTGACTGCGCCCCATGATGCCACAGCTGGGATTATCGGCGTCAACAGGAAAGGACAGGTGTTGTCAGTGTGTGTTGAGGAGGAAAACATCATCCAGTACATTACCAATGTGCTGCAGAATCCAGACCTGGCTTTACGGATGGCAGTCCGCAATAATCTGGCTGGAGCTGAGGAGCTGTTCGGACGCAAGTTTAACAACCTCTTTGCCGGTGGAAATTTTGCAGAGGCAGCTAAAGTAGCTGCTAATGCTCCAAAGGGTATCCTGCGCACCCCTGACACCATACGCCGGTTCCAGAGTGTCCCGGCTCAACCAGGCCAGACGTCCCCACTGCTGCAGTATTTTGGGATCCTCCTGGACCAGGGCCAGCTCAACAAGTTTGAGTCTTTGGAGCTCTGCAGACCCGTCCTTCAGCAGGGCCGCAAACAACTGCTGGAGAAATGGCTGAAGGAGGACAAGCTTGAATGCTCAGAGGAGCTGGGTGACCTGGTGAAGTCTGTGGACCCGACTCTTGCTCTCAGCGTCTATCTGAGGGCCAACGTACCCAACAAAGTCATTCAGTGTTTTGCAGAAACTGGCCAGTTCCCTAAGATTGTCCTGTACGCCAAAAAGGTGGGCTACACTCCAGACTGGATCTTCCTGCTGAGGAACGTGATGCGGATCAGTCCAGATCAGGGTCTGCAGTTTGCTCAGATGCTTGTTCAGGACGAGGAACCGCTGGCTGACATCACACAGATCGTTGATGTGTTTATGGAGTATAACCTGGTCCAGCAGTGCACTTCCTTCCTTTTAGATGCTTTGAAGAACAACCGGCCATCAGAAGGACCACTGCAGACCCGTCTGCTGGAGATGAACCTGATGCACGCACCACAGGTTGCAGATGCCATCCTAGGAAACCAGATGTTCACCAACTACGATCGTGCCCACATCGCCCAACTGTGTGAGAAAGCAGGACTTCTTCAGAGAGCTTTAGAGCATTACACCGACTTGTATGACATCAAACGAGCTGTCGTGCACACACACCTGCTCAACCCGGAGtGGCTGGTCAACTACTTTGGCTCTCTGTCAGTGGAGGACTCTCTGGAGTGTCTGAGGGCCATGCTGTCTGCTAACATCAGACAGAATCTCCAGATCTGCGTCCAGGTGGCGTCCAAGTATCACGAGCAGCTGAGCACACAGTCCCTCACCGAGCTCTTTGAGTCGTTCAAGAGTTTTGAGGGCCTTTTCTACTTTCTTGGCTCAATCGTAAACTTCAGCCAGGACCCAGAGGTGCATTTCAAATACATCCAGGCCGCATGCAAGACGGGCCAAATCAAAGAGGTGGAGCGCATCTGTCGGGAAAGCAACTGCTACAACCCTGAACGTGTCAAGAACTTTCTCAAGGACTTGAATCAGGAAGCTAAACTCACTGACCAGCTGCCTCTCATTATTGTGTGCGATCGCTTCGACTTCGTCCACGACCTTGTTCTTTACCTGTACAGAAACAACCTGCAGAAGTACATCGAAATCTACGTCCAGAAGGTAAACCCAAGCCGTCTGCCTGTGGTGATTGGAGGTCTGCTGGATGTGGACTGCTCTGAGGATGTCATCAAAAACCTGATCCTGGTTGTACGGGGACAGTTTTCCACCGATGAGCTGGTGGCAGAAGTGGAGAAGAGAAACAGACTGAAGCTGTTGTTGCCCTGGCTGGAGTCTCGTATCCACGAGGGCTGTGAGGAGCCAGCTACCCACAATGCCCTGGCCAAGATCTACATCGACAGCAACAACAACCCTGAACGCTTCCTGCGGGAGAACCCATACTACGATAGCCGCGTGGTGGGGAAATACTGCGAAAAACGAGACCCTCATCTGGCCTGTGTGGCCTATGAGAGAGGAACGTGTGACCAGGAGCTGATCAACGTTTGCAATGAGAACTCGCTGTTCAAGAGTTTGTCCCGCTATCTGGTGCGCCGCAGGGACCCTGAGCTATGGGCCAGTGTGCTTCTGGAGACCAACCCCTTCAGGAGGCCCCTTATTGACCAGGTGGTGCAGACAGCCCTGTCAGAGACTCAGGACCCAGAGGAGGTGTCAGTCACAGTGAAGGCCTTCATGACTGCTGACCTGCCCAATGAACTCATTGAGCTGCTGGAAAAGATTGTCCTGGACAACTCCGTCTTCAGTGAACACAGAAACCTGCAGAACCTGCTCATCCTAACAGCCATCAAAGCTGACCGTACTCGGGTCATGGAGTACATCAACCGCCTGGACAACTACGATGCCCCAGACATCGCCAACATCGCCATCAGCAGCGAGCTGTTTGAGGAGGCCTTCGCCATCTTCAAGAAATTCGATGTCAACACCTCTGCAGTGCAGGTTCTGATCGAGCACATTGGTAATCTGGACCGGGCCTATGAGTTTGCGGAGCGCTGCAATGAACCTGCGGTGTGGAGTCAACTGGCCAAGGCTCAGCTTCAGAAGGGTCTCGTCAAAGAGTCCATCGACTCCTACATCAAAGCTGATGATCCTTCAGCTTACATGGAAGTGGTCCAAGCTGCTGACCAAAGTGGAAACTGGGAGGACCTGGTGAAGTTTTTGCAGATGGCCAGAAAGAAGGCCAGAGAGTCTTACGTGGAGACTGAGCTGATCTTCGCTCTGGCCAAAACCAACCGTCTCGCTGAACTGGAGGAGTTTATCAATGGACCAAATAATGCACACATCCAGCAGGTTGGAGATCGCTGCTATGATGAGAAGATGTACGAGGCGGCCAAACTTCTCTACAATAACGTCTCCAACTTCGGCCGCTTGGCTTCCACTCTGGTCCACTTGGGCGAGTATCAAGCCGCTGTCGATGGTGCCCGCAAGGCCAACAGCACTCGCACATGGAAAGAGGTTTGCTTTGCCTGTGTGGATGGAAAGGAGTTCAGATTGGCTCAAATGTGCGGCCTTCATATCGTGGTTCACGCAGATGAATTGGAAGAGCTCATCAACTACTATCAGgACCGTGGCTACTTTGAGGAGCTGATCACCATGCTGGAAGCGGCGCTGGGGTTGGAGCGCGCTCATATGGGCATGTTCACAGAGCTCGCCATCCTCTACTCCAAATTCAAGCCACAGAAGATGAGGGAGCACCTGGAGCTCTTCTGGTCCAGAGTCAACATCCCAAAGGTTTTGAGGGCTGCAGAGCAGGCTCACCTGTGGGCAGAACTGGTTTTCCTGTACGACAAGTATGAAGAGTTTGATAACGCCATCATCACCATGATGAGCCATCCCACAGACGCCTGGAAAGAGGGACAGTTCAAGGACATCATCACCAAGGTGGCCAATGTGGAACTGTACTACAAAGCCATCCAGTTTTATCTGGAATTCAGGCCCTTGTTACTGAACGACCTGCTCATAGTTCTTTCTCCAAGACTCGATCACTCGCGAGCCGTCAACTTCTTCAGCAagGTTAAGCAGCTTCCTCTGGTCAAGCCTTACCTGCGGTCAGTACAAAACCACAACAACAAGTCAGTCAATGAAGCACTTAACAACCTCTTCATCTCAGAGGAGGACTATCAGGCCCTCAGGACGTCCATAGACGCGTACGATAACTTCGACAACATCTCTCTGGCTCAGCGTCTGGAGAAACACGAGTTAATTGAGTTCAGGAGAATCGCTGCTTACCTCTTCAAGGGGAACAACCGCTGGAAGCAGAGCGTGGAGCTGTGCAAGAAAGACAAGCTCTACAAGgATGCCATGCAATATGCATCGGAGTCAAAGGACACAGAGCTGGCCGAGGAGCTGCTGCAGTGGTTCCTGGATGAGAATAAGAAGGAGTGTTTTGCCGCCTGCCTCTTCACCTGCTACGATCTGCTCCGGCCTGACGTGGTGCTGGAGACATCCTGGAGGAACAACATCATGGACTTCGCCATGCCGTACTTCATCCAGGTCATGAGGGAATACCTCAGCAAGGTGGACAAGCTAGAGACCTCTGAGTCCTTGAGGAAAGAGGAGGAGCAAGCGACAGAAACTCAACCAATTGTTTATGGCACACCCCAGCTCATGCTGACAGCAGGCCCCAGTGTGCCCGTCCCACCACAGCAGGGGTATGGCTATGGTTACACAGCAGCTCCTGGTTATCCCCCTCAGGCTCCTCAGGCCCAGCCGGGCTTCGGTTATGGCATGTAA
>TCONS_00005241
AAGCCATCCAGTTTTATCTGGAATTCAGGCCCTTGTTACTGAACGACCTGCTCATAGTTCTTTCTCCAAGACTCGATCACTCGCGAGCCGTCAACTTCTTCAGCAagGTTAAGCAGCTTCCTCTGGTCAAGCCTTACCTGCGGTCAGTACAAAACCACAACAACAAGTCAGTCAATGAAGCACTTAACAACCTCTTCATCTCAGAGGAGGACTATCAGGTACAAACTACACCATAAAGCAGTTTTCTGACACAGTACAGTTTCAGTTTTCATACAAGACCATTAGTGTATTTAGGCTGTTGTCGTTGTAAGACTTCATACACAGTAGTGACATCTATGGGTTGAGTTGATCAGATAATCAGAAAGTACATTCTGATGGATTGTAGGTGGATAAGATGGAACAGACATTTTGCAAATGGTAACTACATTATGGACTAACTAAACTTTGACATTACCTCAGATATGatgtgttttaaatgcatttttcattAGGCAGAAATGGAGGCGAAACCGATTTGAGAGAAAATGATACAGGGAAAAAGGCAATAAAAAGTAGGCCTACAGCGTGGGAGTGTTTTAGCGTGGTCAAC
>TCONS_00005242
GGACCCAGAGGAGGTGTCAGTCACAGTGAAGGCCTTCATGACTGCTGACCTGCCCAATGAACTCATTGAGCTGCTGGAAAAGATTGTCCTGGACAACTCCGTCTTCAGTGAACACAGAAACCTGCAGAACCTGCTCATCCTAACAGCCATCAAAGCTGACCGTACTCGGGTCATGGAGTACATCAACCGCCTGGACAACTACGATGCCCCAGACATCGCCAACATCGCCATCAGCAGCGAGCTGTTTGAGGAGGCCTTCGCCATCTTCAAGAAATTCGATGTCAACACCTCTGCAGTGCAGGTTCTGATCGAGCACATTGGTAATCTGGACCGGGCCTATGAGTTTGCGGAGCGCTGCAATGAACCTGCGGTGTGGAGTCAACTGGCCAAGGCTCAGCTTCAGAAGGGTCTCGTCAAAGAGTCCATCGACTCCTACATCAAAGCTGATGATCCTTCAGCTTACATGGAAGTGGTCCAAGCTGCTGACCAAAGTGGTGAGGCCTTTATCTAGTTCTCATTTTACATTTAGATGACTTTTCCCTCCCTCTGATTCTGTTGTTCATGACTTTATCACTTTGCTCAGGAAACTGGGAGGACCTGGTGAAGTTTTTGCAGATGGCCAGAAAGAAGGCCAGAGAGTCTTACGTGGAGACTGAGCTGATCTTCGCTCTGGCCAAAACCAACCGTCTCGCTGAACTGGAGGAGTTTATCAATGGACCAAATAATGCACACATCCAGCAGGTTAGA

Function

symbol description
cltca Predicted to enable clathrin light chain binding activity. Predicted to be involved in clathrin coat assembly; mitotic cell cycle; and receptor-mediated endocytosis. Predicted to act upstream of or within intracellular protein transport and vesicle-mediated transport. Predicted to be located in clathrin-coated pit and cytoplasmic vesicle. Predicted to be part of clathrin complex. Predicted to be active in clathrin-coated endocytic vesicle and spindle. Is expressed in axial vasculature; blood; intermediate cell mass of mesoderm; notochord; and ventral mesoderm. Human ortholog(s) of this gene implicated in autosomal dominant mental retardation 56. Orthologous to human CLTC (clathrin heavy chain).

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0006898 receptor-mediated endocytosis biological_process
GO:0048268 clathrin coat assembly biological_process
GO:0016192 vesicle-mediated transport biological_process
GO:0000278 mitotic cell cycle biological_process
GO:0030130 clathrin coat of trans-Golgi network vesicle cellular_component
GO:0030132 clathrin coat of coated pit cellular_component
GO:0005819 spindle cellular_component
GO:0005905 clathrin-coated pit cellular_component
GO:0071439 clathrin complex cellular_component
GO:0031410 cytoplasmic vesicle cellular_component
GO:0016020 membrane cellular_component
GO:0045334 clathrin-coated endocytic vesicle cellular_component
GO:0032051 clathrin light chain binding molecular_function
GO:0005198 structural molecule activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-2299 Predicted to enable clathrin light chain binding activity. Predicted to be involved in clathrin coat assembly; mitotic cell cycle; and receptor-mediated endocytosis. Predicted to act upstream of or within intracellular protein transport and vesicle-mediated transport. Predicted to be located in clathrin-coated pit and cytoplasmic vesicle. Predicted to be part of clathrin complex. Predicted to be active in clathrin-coated endocytic vesicle and spindle. Is expressed in axial vasculature; blood; intermediate cell mass of mesoderm; notochord; and ventral mesoderm. Human ortholog(s) of this gene implicated in autosomal dominant mental retardation 56. Orthologous to human CLTC (clathrin heavy chain).

Ensembl:

ensembl_id ENSDARG00000043493

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005239 False 6443 mRNA 0.50 31 28311031 28368913
TCONS_00005240 False 5055 mRNA 0.52 32 28312213 28368695
TCONS_00005241 False 589 lncRNA 0.41 2 28317417 28318086
TCONS_00005242 True 747 lncRNA 0.50 3 28320244 28321824

Neighbor

gene id symbol gene type direction distance location
XLOC_002825 CR392341.5 coding downstream 18072 28292843 ~ 28292959 (-)
XLOC_002823 NA coding downstream 19042 28197916 ~ 28291989 (-)
XLOC_002824 NA coding downstream 62288 28246835 ~ 28248743 (-)
XLOC_002822 rps6kb1a coding downstream 117389 28172344 ~ 28193642 (-)
XLOC_002821 med13a coding downstream 192996 28029578 ~ 28118035 (-)
XLOC_002827 btg3 coding upstream 1903 28370816 ~ 28380928 (-)
XLOC_002828 NA coding upstream 13172 28382085 ~ 28385569 (-)
XLOC_002829 CR392341.4 coding upstream 23513 28392426 ~ 28395620 (-)
XLOC_002830 NA coding upstream 48738 28417651 ~ 28418179 (-)
XLOC_002831 CR392341.1 coding upstream 73827 28442740 ~ 28443740 (-)
XLOC_002819 AL844197.1 non-coding downstream 896669 27414246 ~ 27414362 (-)
XLOC_002817 BX248510.3 non-coding downstream 1140959 27169956 ~ 27170072 (-)
XLOC_002832 CR392341.2 non-coding upstream 78993 28447906 ~ 28448868 (-)
XLOC_002833 CR392341.3 non-coding upstream 85587 28454500 ~ 28455171 (-)

Expression


Co-expression Network