G929323 (LOC106592481)


Basic Information

Item Value
gene id G929323
gene name LOC106592481
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 82839699 ~ 82840188 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1058210
CGTGGGCCAGGGGGTTGTTGTTGATGAATTCCCGTCTGATACTGATGTTCTTGAGCAGACACTGTCTGGCGTGGGCCCTCCTCTCCTTAACCGGGTCTTTGGCACACAGCGAGAAGACGGCCAGGTACTCTAACGGGAGGAGCAGCTTGACCAGAGCCAGGTGTAACTTCTGGGCAAAGATCTGACGCACCTGGTAACACTCATCCTGCAGGAGACCACAGAACACTTCAACAACAAGGACAGAACACTGCAACAACAAGGACAGAACACTTCAAGGACAGAACACTTCAAGGACAGAACACTTCAAGGACAGAACACTGCAACAACAAGGACAGAACACTGCAACAACAAGGACAGAACACTGCAACAACAAGGACAGAACACTTCAAGGACAGAACACTGCAACAACAAGGACAGAACACTTCAAGGA

Function

NR:

description
PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1058210 True 430 lncRNA 0.50 2 82839699 82840188

Neighbor

gene id symbol gene type direction distance location
LOC118936832 LOC105009164 coding upstream 28249 82793509 ~ 82811450 (+)
LOC118936833 NA coding upstream 36527 82799919 ~ 82803172 (+)
LOC118936830 NA coding upstream 97107 82740970 ~ 82780517 (+)
LOC110512972 lias coding upstream 101029 82727415 ~ 82738670 (+)
LOC118936828 wdr19 coding upstream 438459 82316721 ~ 82401240 (+)
LOC110512617 n4bp2 coding downstream 65542 82905730 ~ 82956331 (+)
LOC110515053 rhoh coding downstream 120883 82961071 ~ 82976330 (+)
LOC118936273 nachra9 coding downstream 150660 82990848 ~ 83014394 (+)
LOC118966663 NA coding downstream 181988 83022176 ~ 83102695 (+)
LOC110515357 LOC100196562 coding downstream 275268 83115455 ~ 83131029 (+)
G929257 rpl9 non-coding upstream 23914 82719519 ~ 82815785 (+)
G929316 NA non-coding upstream 26071 82813204 ~ 82813628 (+)
G929267 NA non-coding upstream 64009 82774328 ~ 82775690 (+)
G929307 NA non-coding upstream 72289 82767026 ~ 82767410 (+)
G929328 NA non-coding downstream 16019 82856207 ~ 82857225 (+)
G929341 NA non-coding downstream 44552 82884740 ~ 82887716 (+)
G929346 NA non-coding downstream 111902 82952090 ~ 82952710 (+)
G929353 NA non-coding downstream 139384 82979572 ~ 82980453 (+)
G929355 NA non-coding downstream 144623 82984811 ~ 82985911 (+)
G929305 NA other upstream 77211 82761605 ~ 82762488 (+)
G929159 NA other upstream 530127 82308803 ~ 82309572 (+)
LOC118936827 LOC106591767 other upstream 535417 82261288 ~ 82306725 (+)
G929370 NA other downstream 194924 83035112 ~ 83035491 (+)
LOC110512947 NA other downstream 746400 83586588 ~ 83639961 (+)
LOC110518749 LOC106592297 other downstream 1053406 83893530 ~ 83968790 (+)
LOC110516172 htt other downstream 1154485 83981478 ~ 84112196 (+)

Expression


Co-expression Network