G930294


Basic Information

Item Value
gene id G930294
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 83413211 ~ 83413476 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1059578
ttataattcgaccatgctggtcatttatgaacatttgaacatcttgaccatgttttgttataatctccacccggcacagccagaagaggactggccaccccacatagcctggttcttctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtacgaagggctatataa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1059578 True 266 lncRNA 0.45 1 83413211 83413476

Neighbor

gene id symbol gene type direction distance location
LOC118936836 NA coding upstream 269683 83139955 ~ 83143528 (+)
LOC110515357 LOC100196562 coding upstream 282182 83115455 ~ 83131029 (+)
LOC118966663 NA coding upstream 310516 83022176 ~ 83102695 (+)
LOC118936273 nachra9 coding upstream 398817 82990848 ~ 83014394 (+)
LOC110515053 rhoh coding upstream 436881 82961071 ~ 82976330 (+)
LOC118936837 LOC106592595 coding downstream 135812 83540003 ~ 83557399 (+)
LOC110512943 LOC106602128 coding downstream 146614 83560090 ~ 83562987 (+)
LOC110512947 NA coding downstream 220086 83586588 ~ 83639961 (+)
LOC118937117 NA coding downstream 331197 83744673 ~ 83744836 (+)
LOC118937030 NA coding downstream 333183 83746659 ~ 83746784 (+)
G929465 NA non-coding upstream 51459 83360043 ~ 83361752 (+)
G929457 NA non-coding upstream 69534 83343321 ~ 83343677 (+)
G929455 NA non-coding upstream 71360 83339418 ~ 83341851 (+)
G929437 NA non-coding upstream 119747 83290586 ~ 83293464 (+)
G929422 NA non-coding upstream 133904 83238897 ~ 83279307 (+)
G930297 NA non-coding downstream 6464 83419940 ~ 83424081 (+)
G930298 NA non-coding downstream 10862 83424338 ~ 83426264 (+)
G930327 NA non-coding downstream 112848 83526324 ~ 83530480 (+)
G930328 NA non-coding downstream 113715 83527191 ~ 83529165 (+)
G930325 NA non-coding downstream 115950 83529426 ~ 83531590 (+)
G929370 NA other upstream 377720 83035112 ~ 83035491 (+)
LOC110512617 n4bp2 other upstream 456880 82905730 ~ 82956331 (+)
LOC118936832 LOC105009164 other upstream 614889 82793509 ~ 82811450 (+)
G929305 NA other upstream 650723 82761605 ~ 82762488 (+)
LOC118936830 NA other upstream 670431 82740970 ~ 82780517 (+)
LOC110518749 LOC106592297 other downstream 480118 83893530 ~ 83968790 (+)
LOC110516172 htt other downstream 581197 83981478 ~ 84112196 (+)
LOC110515513 LOC106594142 other downstream 723097 84130437 ~ 84282587 (+)
G930572 LOC106593948 other downstream 741463 84154939 ~ 84155714 (+)

Expression


Co-expression Network