G930327


Basic Information

Item Value
gene id G930327
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 83526324 ~ 83530480 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1059615
aaaaaagcaatacattttgttttactatattatatcacggaccaactattttcccatcaagcaacacggtagaaattctaaatacattgcatttttggtctaaatgttggtctggtaacacacaagtaggcgatgtaccaaaatgctgaaatcacattcgtgcacacagccaaccgaaagacaccatttatttctggtgttttgtagcgttccagacgttgtaggaatagtttcatcacgcttgttttctgctctcagtaaaatatgattccaccatcgaccacagggtggcatacgacccacagatatggaggagaaacagtagcctactacttcatcaacaagacacggtagtagctacaatgggtggtttttaattaattgttttatttcaccaggtaggctagttgggaacaagttctcatttacaaactgcgacctggccaagataaagcacagca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1059615 True 461 lncRNA 0.40 2 83526324 83530480

Neighbor

gene id symbol gene type direction distance location
LOC118936836 NA coding upstream 382796 83139955 ~ 83143528 (+)
LOC110515357 LOC100196562 coding upstream 395295 83115455 ~ 83131029 (+)
LOC118966663 NA coding upstream 423629 83022176 ~ 83102695 (+)
LOC118936273 nachra9 coding upstream 511930 82990848 ~ 83014394 (+)
LOC110515053 rhoh coding upstream 549994 82961071 ~ 82976330 (+)
LOC118936837 LOC106592595 coding downstream 18808 83540003 ~ 83557399 (+)
LOC110512943 LOC106602128 coding downstream 29610 83560090 ~ 83562987 (+)
LOC110512947 NA coding downstream 103082 83586588 ~ 83639961 (+)
LOC118937117 NA coding downstream 214193 83744673 ~ 83744836 (+)
LOC118937030 NA coding downstream 216179 83746659 ~ 83746784 (+)
G930298 NA non-coding upstream 100060 83424338 ~ 83426264 (+)
G930297 NA non-coding upstream 102243 83419940 ~ 83424081 (+)
G930294 NA non-coding upstream 112848 83413211 ~ 83413476 (+)
G929465 NA non-coding upstream 164572 83360043 ~ 83361752 (+)
G929457 NA non-coding upstream 182647 83343321 ~ 83343677 (+)
G930321 NA non-coding downstream 11719 83542199 ~ 83546625 (+)
G930312 NA non-coding downstream 36264 83566744 ~ 83607611 (+)
G930332 NA non-coding downstream 40206 83570686 ~ 83571439 (+)
G930333 NA non-coding downstream 42783 83573263 ~ 83573958 (+)
G929370 NA other upstream 490833 83035112 ~ 83035491 (+)
LOC110512617 n4bp2 other upstream 569993 82905730 ~ 82956331 (+)
LOC118936832 LOC105009164 other upstream 728002 82793509 ~ 82811450 (+)
G929305 NA other upstream 763836 82761605 ~ 82762488 (+)
LOC118936830 NA other upstream 783544 82740970 ~ 82780517 (+)
LOC110518749 LOC106592297 other downstream 363114 83893530 ~ 83968790 (+)
LOC110516172 htt other downstream 464193 83981478 ~ 84112196 (+)
LOC110515513 LOC106594142 other downstream 606093 84130437 ~ 84282587 (+)
G930572 LOC106593948 other downstream 624459 84154939 ~ 84155714 (+)

Expression


Co-expression Network