G930321


Basic Information

Item Value
gene id G930321
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 83542199 ~ 83546625 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1059606
cacaagtaggccttttccttgacattatcaggacatgacaggcataatcaccagtgctacaataacatatcacacacatccgggttatcagaagacagaaatgtatctctgaggcctttagttgacttatAAACAGACCCTACATTCTATAGCCACTCATCTGATAAGAACATGTCAATGTTGACAAATGTCCTTCTCAACACGACACTCAATAGAAGAGCGAGTTAAAACACATCGAATTAATAAATATGTCCCtaaattatttttaacatcaagatcaggggagagcgcgaacgcagtcccccactaccagaaattatgcaatcgagatttccacatttgagaaattcgcaggggtcagcacagccggagtgcaatggctgagcctcgccctgggtgaaccgccttcgtgatcacggtgtctcccttgccaggtaagtatgagttgtacacgttggtagaggagtactccttccaggacaaaggtgtttgactcacggttaccacttctactactgataataccacatcatattgaacagggtttaatgacgtttacgaatacagttgcggacaaggcgaagaaaaaagcaatacattttgttttactatattatatcacggaccgactattttcccatcaagcaacacggtagaaattctaaatacattgcattttaggtctaaatgttggtctggtaacacacaagtaggcgatgtaccaaaatgctgaaatcacattcgtgcacacagccaaccgaaagacaccatttatttctggtgttttgtagcgttccagacgttgtaggaatagtttcatcacgcttgttttctgctctcagtaaaatatgattccaccatcgaccacagggtggcatacgacccacagatatggaggagatacagtagcctactacttcatcaTCAACAAGACACAGTAGTAGCTACTCTGGGTGTGCTGACagggccatactcgtatttgtaatttgTCACAGTAGCAGGTAGCAGAAATCTGAATGATAACACTATGATCAGACCAGAAACACGCCAGGAAAAGAGATTGGATGAAATGATGAAGCCAGCGGAGGAAGAACTACAGCTTCActctatccaatcagagcagcaggatcaaCCTACAGCCCCGCCCTCCTCTTTACAGACATACAAACTAGCCAGGAGATTGATTTTAAATCACGCACATGATTGAGAGAATCTTGCTGGCACCCAAAGAAGAAAGAAATAAGTTTATTTCGATCACAGATTATTACAAAAAAAGACCTGGATCATAATCGTATCCAGAAAATTGCCCATATCAGTTACGATCCTCGTTTTGTCTGACTACTCGAGTAGCTACAGTAACAGAGACGTTAACAATGAACCCAATGTTCTTTATGTGGTAATAGGACGTGGGAGAAACGTTTCTCTTAATAACAGTAAGTGTTACACATATTGATGCAGACAACATGCA

Function

NR:

description
PREDICTED: calcium-binding protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1059606 True 1468 lncRNA 0.42 2 83542199 83546625

Neighbor

gene id symbol gene type direction distance location
LOC118936836 NA coding upstream 398671 83139955 ~ 83143528 (+)
LOC110515357 LOC100196562 coding upstream 411170 83115455 ~ 83131029 (+)
LOC118966663 NA coding upstream 439504 83022176 ~ 83102695 (+)
LOC118936273 nachra9 coding upstream 527805 82990848 ~ 83014394 (+)
LOC110515053 rhoh coding upstream 565869 82961071 ~ 82976330 (+)
LOC118936837 LOC106592595 coding downstream 2663 83540003 ~ 83557399 (+)
LOC110512943 LOC106602128 coding downstream 13465 83560090 ~ 83562987 (+)
LOC110512947 NA coding downstream 86937 83586588 ~ 83639961 (+)
LOC118937117 NA coding downstream 198048 83744673 ~ 83744836 (+)
LOC118937030 NA coding downstream 200034 83746659 ~ 83746784 (+)
G930325 NA non-coding upstream 10609 83529426 ~ 83531590 (+)
G930327 NA non-coding upstream 11719 83526324 ~ 83530480 (+)
G930328 NA non-coding upstream 13034 83527191 ~ 83529165 (+)
G930298 NA non-coding upstream 115935 83424338 ~ 83426264 (+)
G930297 NA non-coding upstream 118118 83419940 ~ 83424081 (+)
G930312 NA non-coding downstream 20119 83566744 ~ 83607611 (+)
G930332 NA non-coding downstream 24061 83570686 ~ 83571439 (+)
G930333 NA non-coding downstream 26638 83573263 ~ 83573958 (+)
G930344 NA non-coding downstream 48607 83595232 ~ 83602052 (+)
G929370 NA other upstream 506708 83035112 ~ 83035491 (+)
LOC110512617 n4bp2 other upstream 585868 82905730 ~ 82956331 (+)
LOC118936832 LOC105009164 other upstream 743877 82793509 ~ 82811450 (+)
G929305 NA other upstream 779711 82761605 ~ 82762488 (+)
LOC118936830 NA other upstream 799419 82740970 ~ 82780517 (+)
LOC110518749 LOC106592297 other downstream 346969 83893530 ~ 83968790 (+)
LOC110516172 htt other downstream 448048 83981478 ~ 84112196 (+)
LOC110515513 LOC106594142 other downstream 589948 84130437 ~ 84282587 (+)
G930572 LOC106593948 other downstream 608314 84154939 ~ 84155714 (+)

Expression


Co-expression Network