Gene
RNA
| Item | Value |
|---|---|
| gene id | G930317 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 83616130 ~ 83617088 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: protein NLRC3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1059601 | True | 906 | lncRNA | 0.44 | 2 | 83616130 | 83617088 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110512943 | LOC106602128 | coding | upstream | 53143 | 83560090 ~ 83562987 (+) |
| LOC118936837 | LOC106592595 | coding | upstream | 58731 | 83540003 ~ 83557399 (+) |
| LOC118936836 | NA | coding | upstream | 472602 | 83139955 ~ 83143528 (+) |
| LOC110515357 | LOC100196562 | coding | upstream | 485101 | 83115455 ~ 83131029 (+) |
| LOC118966663 | NA | coding | upstream | 513435 | 83022176 ~ 83102695 (+) |
| LOC110512947 | NA | coding | downstream | 16474 | 83586588 ~ 83639961 (+) |
| LOC118937117 | NA | coding | downstream | 127585 | 83744673 ~ 83744836 (+) |
| LOC118937030 | NA | coding | downstream | 129571 | 83746659 ~ 83746784 (+) |
| LOC118937033 | NA | coding | downstream | 131565 | 83748653 ~ 83748778 (+) |
| LOC118936990 | NA | coding | downstream | 133559 | 83750647 ~ 83750810 (+) |
| G930312 | NA | non-coding | upstream | 8519 | 83566744 ~ 83607611 (+) |
| G930344 | NA | non-coding | upstream | 14078 | 83595232 ~ 83602052 (+) |
| G930333 | NA | non-coding | upstream | 42172 | 83573263 ~ 83573958 (+) |
| G930332 | NA | non-coding | upstream | 44691 | 83570686 ~ 83571439 (+) |
| G930315 | NA | non-coding | downstream | 185 | 83617273 ~ 83684302 (+) |
| G930352 | NA | non-coding | downstream | 6892 | 83623980 ~ 83625115 (+) |
| G930339 | NA | non-coding | downstream | 47265 | 83664353 ~ 83665246 (+) |
| G930357 | NA | non-coding | downstream | 51547 | 83668635 ~ 83670393 (+) |
| G930313 | NA | non-coding | downstream | 61326 | 83678414 ~ 83682799 (+) |
| G929370 | NA | other | upstream | 580639 | 83035112 ~ 83035491 (+) |
| LOC110512617 | n4bp2 | other | upstream | 659799 | 82905730 ~ 82956331 (+) |
| LOC118936832 | LOC105009164 | other | upstream | 817808 | 82793509 ~ 82811450 (+) |
| G929305 | NA | other | upstream | 853642 | 82761605 ~ 82762488 (+) |
| LOC118936830 | NA | other | upstream | 873350 | 82740970 ~ 82780517 (+) |
| LOC110518749 | LOC106592297 | other | downstream | 276506 | 83893530 ~ 83968790 (+) |
| LOC110516172 | htt | other | downstream | 377585 | 83981478 ~ 84112196 (+) |
| LOC110515513 | LOC106594142 | other | downstream | 519485 | 84130437 ~ 84282587 (+) |
| G930572 | LOC106593948 | other | downstream | 537851 | 84154939 ~ 84155714 (+) |
| G931108 | LOC107756720 | other | downstream | 1059471 | 84676559 ~ 84677078 (+) |
