G930352


Basic Information

Item Value
gene id G930352
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 83623980 ~ 83625115 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1059658
gcattttagctatGTAGCAAAGGACAACAAACAAGAAAAGCGTGTTCTGTATAACAGAGTGatagatagtgtactgtataacagagtgatagacagtgtactgtataacagagtgatagacagtgtactgtataacagagtgatagaccgtgTACTGTATAACAGAATGATAATGTATAACAGAGTGATAGATCGTGTACtgtataacagagtgatagaccgtgTACTGTATAACAGAGTGATAGATCGTGTACTGTATAACAGTGTACTGTATAACAGTGTACTGTATAACAGAGTGAtagataatgtactgtataacagagtgatactgaatgacagagtgatagactgtactgtataacagagtgatagattgtgtactgtatgacagagtgatagattGTGTACTGTATAACAGTGTGATAGATCGTGTACTGTATAACAGAGTGATAGATCGTGTACTGTATAACAGAGTGATAGATCGTGTACTGTATAACAGAGTGATACtgaatgacagagtgatagaccgtgtactgtataacagagtgatagaccgtgtactgtataacagagtgatagaccgtgTACTGTATATCAGAGTGATAGACCCTTtcatcaacatgacagagaggatgTCATTAGTGTTTCTCTACAATTAGGGTGAGTCAACGTGTTTTTTTTCTACTTGTTTGAaagtgcacacagacacacacatgttgTACCATGAACCGTTCTTTGCAACGTgcagtaactctctgtggttctaaattaatagttgtttagtggtccagAAATGTCGGAAatattaacttgcttgaccatgctgtaggtcatgtaactgtctgTTAAATACAATATGCTGTGTGGACTTAACCGGACAGATG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106593923

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1059658 True 884 lncRNA 0.37 2 83623980 83625115

Neighbor

gene id symbol gene type direction distance location
LOC110512943 LOC106602128 coding upstream 60993 83560090 ~ 83562987 (+)
LOC118936837 LOC106592595 coding upstream 66581 83540003 ~ 83557399 (+)
LOC118936836 NA coding upstream 480452 83139955 ~ 83143528 (+)
LOC110515357 LOC100196562 coding upstream 492951 83115455 ~ 83131029 (+)
LOC118966663 NA coding upstream 521285 83022176 ~ 83102695 (+)
LOC110512947 NA coding downstream 8447 83586588 ~ 83639961 (+)
LOC118937117 NA coding downstream 119558 83744673 ~ 83744836 (+)
LOC118937030 NA coding downstream 121544 83746659 ~ 83746784 (+)
LOC118937033 NA coding downstream 123538 83748653 ~ 83748778 (+)
LOC118936990 NA coding downstream 125532 83750647 ~ 83750810 (+)
G930317 NA non-coding upstream 6892 83616130 ~ 83617088 (+)
G930312 NA non-coding upstream 16369 83566744 ~ 83607611 (+)
G930344 NA non-coding upstream 21928 83595232 ~ 83602052 (+)
G930333 NA non-coding upstream 50022 83573263 ~ 83573958 (+)
G930332 NA non-coding upstream 52541 83570686 ~ 83571439 (+)
G930339 NA non-coding downstream 39238 83664353 ~ 83665246 (+)
G930357 NA non-coding downstream 43520 83668635 ~ 83670393 (+)
G930313 NA non-coding downstream 53299 83678414 ~ 83682799 (+)
G930350 LOC106593304 non-coding downstream 65175 83690290 ~ 83723048 (+)
G930374 NA non-coding downstream 68275 83693390 ~ 83697156 (+)
G929370 NA other upstream 588489 83035112 ~ 83035491 (+)
LOC110512617 n4bp2 other upstream 667649 82905730 ~ 82956331 (+)
LOC118936832 LOC105009164 other upstream 825658 82793509 ~ 82811450 (+)
G929305 NA other upstream 861492 82761605 ~ 82762488 (+)
LOC118936830 NA other upstream 881200 82740970 ~ 82780517 (+)
LOC110518749 LOC106592297 other downstream 268479 83893530 ~ 83968790 (+)
LOC110516172 htt other downstream 369558 83981478 ~ 84112196 (+)
LOC110515513 LOC106594142 other downstream 511458 84130437 ~ 84282587 (+)
G930572 LOC106593948 other downstream 529824 84154939 ~ 84155714 (+)
G931108 LOC107756720 other downstream 1051444 84676559 ~ 84677078 (+)

Expression


Co-expression Network