XLOC_002827 (btg3)


Basic Information

Item Value
gene id XLOC_002827
gene name btg3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 28370816 ~ 28380928 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005243
CTCCGAGCATGCGCACAAGACACAGTCACGTCACACACATAGTCGCGCGGGGGAGCTGGATTGGAAGTGGCTTGTGCGCGAGGCAGAAGGAGTTTTCCACATGTGGATGAAAAGAAAACACGAAGTTGGACCTGAATTTCAGCTCAACAGCTAACAATGAAGAAAGAAATTGCAGCGGTGGTGTTTTTCCTGAAGCGGTTGATAAAGAAAGCTGAGAAGTTAGATGCGGACAAGGTGGACCTGTTTGTGGAGCGGTTAACAGTAGCATTACAGGAGAAGTATAAAGGTCACTGGTATCCGGACAACCCCAGCAAAGGCCAGGCATTCAGGTGCATCAGAGTCAACCGCTTCCAGAAAGAAGATGCTGAGTTGCTGAGAGCTTGCGCTGAAAGTGGAGTGCAGTACAAAGACCTTGGCCTGCCTAAAGAGCTCACACTTTGGGTTGATCCTGGTGAGGTGTGCTGTAGGTATGGCGAGAAGAATCATGGTTTCACTGTGGCCACTTTCTCAAGCGAGGACGATGATGATAAAGAGGATGTGACAAAGAAAGTGACGAGCGCCGTGGAGCGGGTCACGTCGGATTACCACTCTGGATCCTCCTCAGATGAAGACATCAGCATGTTAGTTCATCGGTGTTAGTGTGAGGGGTGTTACgttgaaaagtgtttttttgaagTTACCACTAAGACGACTGACCAAATTTTTTAAGAAACGTATTTTTGTAGTTCTACTGTCACTGTTTTTTGAATTTGTGACTCGTCTGTTTTTTAAAGGAACGATAACTGTAACTGTTTGCACTTTAGAGTATTTGTAATAGAGCGTGTATTCGTACATATTGGATTAGGAGTATTTAGAGTATTTCAATTTTTATGGTAATGGAAAATTGTGCTGTATTTGTTATATGGGATcatttgataacactttacatcatgttttatttattcacagTAAACTATTATGTATTGCATAGACCACttaaattatgaataacattAAAAAGACGTTTTCAtgaa
>TCONS_00005247
TGCGCACAAGACACAGTCACGTCACACACATAGTCGCGCGGGGGAGCTGGATTGGAAGTGGCTTGTGCGCGAGGCAGAAGGAGTTTTCCACATGTGGATGAAAAGAAAACACGAAGTTGGACCTGAATTTCAGCTCAACAGCTAACAATGAAGAAAGAAATTGCAGCGGTGGTGTTTTTCCTGAAGCGGTTGATAAAGAAAGCTGAGAAGTTAGATGCGGACAAGGTGGACCTGTTTGTGGAGCGGTTAACAGTAGCATTACAGGAGAAGTATAAAGGTCACTGGTATCCGGACAACCCCAGCAAAGGCCAGGCATTCAGGTGCATCAGAGTCAACCGCTTCCAGAAAGAAGATGCTGAGTTGCTGAGAGCTTGCGCTGAAAGTGGAGTGCAGTACAAAGACCTTGGCCTGCCTAAAGAGCTCACACTTTGGGTTGATCCTGGTGAGGTGTGCTGTAGGTATGGCGAGAAGAATCATGGTTTCACTGTGGCCACTTTCTCAAGCGAGGACGATGATGATAAAGAGGATGTGACAAAGAAAGTGACGAGCGCCGTGGAGCGGGTCACGTCGGATTACCACTCTGGATCCTCCTCAGATGAAGACATCAGCTGTAGGGAGATCCAGTATACGACACCTCTTCACAACCAGCCTCCTTACCAGGTTGTTTATGCCAGTGCCCCAGGATGGCATCCGGTACCAAGAAAGAAATTTGGCCCGGGGAAAGGGCACTACCCTCAGCGGCCGCACTACATGATCCGCCCCCCCTGTAGACCCAACCATTCCTTTAAAGCACACAGCTGGGTCCAGCAGGGCTACCGCAGCAAACCCGGCTACTGGGCCAGCAATTCAAACCTACTACACCAGCTTCAGTGACCACTCTTACTACAGCATGTTAGTTCATCGGTGTTAGTGTGAGGGGTGTTACgttgaaaagtgtttttttgaagTTACCACTAAGACGACTGACCAAATTTTTTAAGAAACGTATTTTTGTAGTTCTACTGTCACTGTTTTTTGAATTTGTGACTCGTCTGTTTTTTAAAGGAACGATAACTGTAACTGTTTGCACTTTAGAGTATTTGTAATAGAGCGTGTATTCGTACATATTGGATTAGGAGTATTTAGAGTATTTCAATTTTTATGGTAATGGAAAATTGTGCTGTATTTGTTATATGGGATcatttgataacactttacatcatgttttatttattcacagTAAACTATTATGTATTGCATAGACCACttaaattatgaataacattAAAAAGACGTTTTCAtg
>TCONS_00005246
TGCGCACAAGACACAGTCACGTCACACACATAGTCGCGCGGGGGAGCTGGATTGGAAGTGGCTTGTGCGCGAGGCAGAAGGAGTTTTCCACATGTGGATGAAAAGAAAACACGCTTTGTGCTAATCACTTGCTCTAGTGCACACTAGCTTTAGTATCAACAGCCAAGTTGTTATGAGCTTATGTTTCTGAAGTTGGACCTGAATTTCAGCTCAACAGCTAACAATGAAGAAAGAAATTGCAGCGGTGGTGTTTTTCCTGAAGCGGTTGATAAAGAAAGCTGAGAAGTTAGATGCGGACAAGGTGGACCTGTTTGTGGAGCGGTTAACAGTAGCATTACAGGAGAAGTATAAAGGTCACTGGTATCCGGACAACCCCAGCAAAGGCCAGGCATTCAGGTGCATCAGAGTCAACCGCTTCCAGAAAGAAGATGCTGAGTTGCTGAGAGCTTGCGCTGAAAGTGGAGTGCAGTACAAAGACCTTGGCCTGCCTAAAGAGCTCACACTTTGGGTTGATCCTGGTGAGGTGTGCTGTAGGTATGGCGAGAAGAATCATGGTTTCACTGTGGCCACTTTCTCAAGCGAGGACGATGATGATAAAGAGGATGTGACAAAGAAAGTGACGAGCGCCGTGGAGCGGGTCACGTCGGATTACCACTCTGGATCCTCCTCAGATGAAGACATCAGCTGTAGGGAGATCCAGTATACGACACCTCTTCACAACCAGCCTCCTTACCAGGTTGTTTATGCCAGTGCCCCAGGATGGCATCCGGTACCAAGAAAGAAATTTGGCCCGGGGAAAGGGCACTACCCTCAGCGGCCGCACTACATGATCCGCCCCCCCTGTAGACCCAACCATTCCTTTAAAGCACACAGCTGGGTCCAGCAGGGCTACCGCAGCAAACCCGGCTACTGGGCCAGCAATTCAAACCTACTACACCAGCTTCAGTGACCACTCTTACTACAGCATGTTAGTTCATCGGTGTTAGTGTGAGGGGTGTTACgttgaaaagtgtttttttgaagTTACCACTAAGACGACTGACCAAATTTTTTAAGAAACGTATTTTTGTAGTTCTACTGTCACTGTTTTTTGAATTTGTGACTCGTCTGTTTTTTAAAGGAACGATAACTGTAACTGTTTGCACTTTAGAGTATTTGTAATAGAGCGTGTATTCGTACATATTGGATTAGGAGTATTTAGAGTATTTCAATTTTTATGGTAATGGAAAATTGTGCTGTATTTGTTATATGGGATcatttgataacactttacatcatgttttatttattcacagTAAACTATTATGTATTGCATAGACCACttaaattatgaataacattAAAAAGACGTTTTCAtg
>TCONS_00005245
TGCGCACAAGACACAGTCACGTCACACACATAGTCGCGCGGGGGAGCTGGATTGGAAGTGGCTTGTGCGCGAGGCAGAAGGAGTTTTCCACATGTGGATGAAAAGAAAACACGTCTCTTTATATTTATAGAAGTTGGACCTGAATTTCAGCTCAACAGCTAACAATGAAGAAAGAAATTGCAGCGGTGGTGTTTTTCCTGAAGCGGTTGATAAAGAAAGCTGAGAAGTTAGATGCGGACAAGGTGGACCTGTTTGTGGAGCGGTTAACAGTAGCATTACAGGAGAAGTATAAAGGTCACTGGTATCCGGACAACCCCAGCAAAGGCCAGGCATTCAGGTGCATCAGAGTCAACCGCTTCCAGAAAGAAGATGCTGAGTTGCTGAGAGCTTGCGCTGAAAGTGGAGTGCAGTACAAAGACCTTGGCCTGCCTAAAGAGCTCACACTTTGGGTTGATCCTGGTGAGGTGTGCTGTAGGTATGGCGAGAAGAATCATGGTTTCACTGTGGCCACTTTCTCAAGCGAGGACGATGATGATAAAGAGGATGTGACAAAGAAAGTGACGAGCGCCGTGGAGCGGGTCACGTCGGATTACCACTCTGGATCCTCCTCAGATGAAGACATCAGCTGTAGGGAGATCCAGTATACGACACCTCTTCACAACCAGCCTCCTTACCAGGTTGTTTATGCCAGTGCCCCAGGATGGCATCCGGTACCAAGAAAGAAATTTGGCCCGGGGAAAGGGCACTACCCTCAGCGGCCGCACTACATGATCCGCCCCCCCTGTAGACCCAACCATTCCTTTAAAGCACACAGCTGGGTCCAGCAGGGCTACCGCAGCAAACCCGGCTACTGGGCCAGCAATTCAAACCTACTACACCAGCTTCAGTGACCACTCTTACTACAGCATGTTAGTTCATCGGTGTTAGTGTGAGGGGTGTTACgttgaaaagtgtttttttgaagTTACCACTAAGACGACTGACCAAATTTTTTAAGAAACGTATTTTTGTAGTTCTACTGTCACTGTTTTTTGAATTTGTGACTCGTCTGTTTTTTAAAGGAACGATAACTGTAACTGTTTGCACTTTAGAGTATTTGTAATAGAGCGTGTATTCGTACATATTGGATTAGGAGTATTTAGAGTATTTCAATTTTTATGGTAATGGAAAATTGTGCTGTATTTGTTATATGGGATcatttgataacactttacatcatgttttatttattcacagTAAACTATTATGTATTGCATAGACCACttaaattatgaataacattAAAAAGACGTTTTCAtg
>TCONS_00005244
TGCGCACAAGACACAGTCACGTCACACACATAGTCGCGCGGGGGAGCTGGATTGGAAGTGGCTTGTGCGCGAGGCAGAAGGAGTTTTCCACATGTGGATGAAAAGAAAACACGAAGTTGGACCTGAATTTCAGCTCAACAGCTAACAATGAAGAAAGAAATTGCAGCGGTGGTGTTTTTCCTGAAGCGGTTGATAAAGAAAGCTGAGAAGTTAGATGCGGACAAGGTGGACCTGTTTGTGGAGCGGTTAACAGTAGCATTACAGGAGAAGTATAAAGGTCACTGGTATCCGGACAACCCCAGCAAAGGCCAGGCATTCAGGTGCATCAGAGTCAACCGCTTCCAGAAAGAAGATGCTGAGTTGCTGAGAGCTTGCGCTGAAAGTGGAGTGCAGTACAAAGACCTTGGCCTGCCTAAAGAGCTCACACTTTGGGTTGATCCTGGTGAGGTGTGCTGTAGGTATGGCGAGAAGAATCATGGTTTCACTGTGGCCACTTTCTCAAGCGAGGACGATGATGATAAAGAGGATGTGACAAAGAAAGTGACGAGCGCCGTGGAGCGGGTCACGTCGGATTACCACTCTGGATCCTCCTCAGATGAAGACAGCATGTTAGTTCATCGGTGTTAGTGTGAGGGGTGTTACgttgaaaagtgtttttttgaagTTACCACTAAGACGACTGACCAAATTTTTTAAGAAACGTATTTTTGTAGTTCTACTGTCACTGTTTTTTGAATTTGTGACTCGTCTGTTTTTTAAAGGAACGATAACTGTAACTGTTTGCACTTTAGAGTATTTGTAATAGAGCGTGTATTCGTACATATTGGATTAGGAGTATTTAGAGTATTTCAATTTTTATGGTAATGGAAAATTGTGCTGTATTTGTTATATGGGATcatttgataacactttacatcatgttttatttattcacagTAAACTATTATGTATTGCATAGACCACttaaattatgaataacattAAAAAGACGTTTTCAtg
>TCONS_00005248
ATATGAATTCAAGGCCTGggaagtacttaaaaacaaacattggcttgaaagtgcttgaatttatagttttattgagtttATGATGTTATTTCTTTAACAACTGTAATGAACTGAGAATTCATCATTTtaaaatttacacatttaaagaactttgacaaataatgcattttagcaatattttagaAACTGCATTTAAATAATACCAGTATTGAATTCAACTAATTGcattgaagttttttttaacatgactgCTTAAAACTgtcaacattttgaaaatgacacattcaaaacatcatcattgacattttaatttaaatattaagtgtaaataaaatgttaagtacaAGAAGGACTTTCATGGCACTGTATATGCTGGGGTGTTCATTACAAAGGTGCATGGTTTAAAACTATTAGTGACTTTAAAAGTCCTGGAATTTGGTGTCCATGAAAGAGTAAGAACTCTGTGatgtgttggtttgtttttgacCCATCTTTTCTTCTGGCTACAGGTATGGCGAGAAGAATCATGGTTTCACTGTGGCCACTTTCTCAAGCGAGGACGATGATGATAAAGAGGATGTGACAAAGAAAGTGACGAGCGCCGTGGAGCGGGTCACGTCGGATTACCACTCTGGATCCTCCTCAGATGAAGACATCAGCTGTAGGGAGATCCAGTATACGACACCTCTTCACAACCAGCCTCCTTACCAGGTTGTTTATGCCAGTGCCCCAGGATGGCATCCGGTACCAAGAAAGAAATTTGGCCCGGGGAAAGGGCACTACCCTCAGCGGCCGCACTACATGATCCGCCCCCCCTGTAGACCCAACCATTCCTTTAAAGCACACAGCTGGGTCCAGCAGGGCTACCGCAGCAAACCCGGCTACTGGGCCAGCAATTCAAACCTACTACACCAGCTTCAGTGACCACTCTTACTACAGCAT

Function

symbol description
btg3 Predicted to be involved in negative regulation of cell population proliferation and negative regulation of mitotic cell cycle. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including immature eye; nervous system; pectoral fin bud; pectoral fin musculature; and segmental plate.

GO:

id name namespace
GO:0008285 negative regulation of cell population proliferation biological_process
GO:0045930 negative regulation of mitotic cell cycle biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-031113-19 Predicted to be involved in negative regulation of cell population proliferation and negative regulation of mitotic cell cycle. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including immature eye; nervous system; pectoral fin bud; pectoral fin musculature; and segmental plate.

Ensembl:

ensembl_id ENSDARG00000069065

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005243 False 1013 mRNA 0.42 5 28370816 28380928
TCONS_00005247 False 1282 mRNA 0.45 5 28370818 28380919
TCONS_00005246 False 1358 mRNA 0.45 6 28370818 28380919
TCONS_00005245 False 1299 mRNA 0.45 5 28370818 28380919
TCONS_00005244 False 999 mRNA 0.42 5 28370818 28380919
TCONS_00005248 True 942 processed_transcript 0.40 2 28371209 28372485

Neighbor

gene id symbol gene type direction distance location
XLOC_002826 cltca coding downstream 1903 28311031 ~ 28368913 (-)
XLOC_002825 CR392341.5 coding downstream 77857 28292843 ~ 28292959 (-)
XLOC_002823 NA coding downstream 78827 28197916 ~ 28291989 (-)
XLOC_002824 NA coding downstream 122073 28246835 ~ 28248743 (-)
XLOC_002822 rps6kb1a coding downstream 177174 28172344 ~ 28193642 (-)
XLOC_002828 NA coding upstream 1157 28382085 ~ 28385569 (-)
XLOC_002829 CR392341.4 coding upstream 11498 28392426 ~ 28395620 (-)
XLOC_002830 NA coding upstream 36723 28417651 ~ 28418179 (-)
XLOC_002831 CR392341.1 coding upstream 61812 28442740 ~ 28443740 (-)
XLOC_002832 CR392341.2 coding upstream 66978 28447906 ~ 28448868 (-)
XLOC_002819 AL844197.1 non-coding downstream 956454 27414246 ~ 27414362 (-)
XLOC_002817 BX248510.3 non-coding downstream 1200744 27169956 ~ 27170072 (-)
XLOC_002833 CR392341.3 non-coding upstream 73572 28454500 ~ 28455171 (-)

Expression


Co-expression Network