G930469


Basic Information

Item Value
gene id G930469
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 83746858 ~ 83759436 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1059813
tcgtgttgagaaggacatttgtcaacatttgcatgttcttatcagatgaatggctatagaatgtagggtctgtttatgagtcaactaaggcctcagagatacattttgtcttctgataacccggatgtgtgtgatatgttattgtagcactggtgattatgcctgtcatgtcctgataatgtcaaggcaaaggcctaattgtgaatggatcattttgtgccctcatgatgtaatctgGATTGAGGTCTTTCATTTGCTAGAATATTAAATAATTTATAGGAGAGTTTGTAATTTAAGACCACAGTACATGTCAACCATTACAATGCCACAGAAATTTCCCTGGTCAACTATtaccatgaaaacagacatttccctggtcaaccattaccatgacaacagacatttccctggtcaaccattaccatgccacagtcatgtccctggtcaaaaattaccatgacaacagacatttccctcgtcaactattaccatgacaacagacatttccctggtcaaccattaccatgaaaacagacatttccctggtcaaccattaccatgacaacagacatttccctggtcaaccgttacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1059813 True 592 lncRNA 0.40 2 83746858 83759436

Neighbor

gene id symbol gene type direction distance location
LOC118937030 NA coding upstream 74 83746659 ~ 83746784 (+)
LOC118937117 NA coding upstream 2022 83744673 ~ 83744836 (+)
LOC110512947 NA coding upstream 110118 83586588 ~ 83639961 (+)
LOC110512943 LOC106602128 coding upstream 183871 83560090 ~ 83562987 (+)
LOC118936837 LOC106592595 coding upstream 189459 83540003 ~ 83557399 (+)
LOC118937044 NA coding downstream 926 83760362 ~ 83760473 (+)
LOC118937021 NA coding downstream 2899 83762335 ~ 83762474 (+)
LOC118937025 NA coding downstream 5002 83764438 ~ 83764589 (+)
LOC118937022 NA coding downstream 7011 83766447 ~ 83766586 (+)
LOC118937029 NA coding downstream 9114 83768550 ~ 83768701 (+)
G930461 NA non-coding upstream 6944 83739627 ~ 83739914 (+)
G930459 NA non-coding upstream 7465 83739170 ~ 83739393 (+)
G930384 NA non-coding upstream 21560 83725078 ~ 83725298 (+)
G930377 NA non-coding upstream 45233 83700687 ~ 83701625 (+)
G930374 NA non-coding upstream 49702 83693390 ~ 83697156 (+)
G930466 NA non-coding downstream 58692 83818128 ~ 83830444 (+)
G930485 NA non-coding downstream 84351 83843787 ~ 83844002 (+)
G930486 NA non-coding downstream 85091 83844527 ~ 83848499 (+)
G930487 NA non-coding downstream 89408 83848844 ~ 83849076 (+)
G930498 NA non-coding downstream 110746 83870182 ~ 84086362 (+)
G929370 NA other upstream 711367 83035112 ~ 83035491 (+)
LOC110512617 n4bp2 other upstream 790527 82905730 ~ 82956331 (+)
LOC118936832 LOC105009164 other upstream 948536 82793509 ~ 82811450 (+)
G929305 NA other upstream 984370 82761605 ~ 82762488 (+)
LOC110518749 LOC106592297 other downstream 134158 83893530 ~ 83968790 (+)
LOC110516172 htt other downstream 235237 83981478 ~ 84112196 (+)
LOC110515513 LOC106594142 other downstream 377137 84130437 ~ 84282587 (+)
G930572 LOC106593948 other downstream 395503 84154939 ~ 84155714 (+)
G931108 LOC107756720 other downstream 917123 84676559 ~ 84677078 (+)

Expression


Co-expression Network