G930472


Basic Information

Item Value
gene id G930472
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 83748503 ~ 83789810 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1059816
gcttttttcttcgccttgtccgcaactgtattcgtaaacgtcattaaaccctgttcaatatgatgtggtattatcagtagtagaagtggtaaccgtgagtcaaacacctttgtcctggaaggagtactcctctaccaacgtgtacaactcatacttacctggcaagggagacaccgtgatcacgaaggcggttcacccagggcgaggctcagccattgcactctgactgtgctgacccctgcgaatttctcaaatgtggaaatctcgattgcataatttctggtagtgggggactgcgttcgcgctctcccc

Function

NR:

description
PREDICTED: calcium-binding protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1059816 True 312 lncRNA 0.49 2 83748503 83789810

Neighbor

gene id symbol gene type direction distance location
LOC118937030 NA coding upstream 1719 83746659 ~ 83746784 (+)
LOC118937117 NA coding upstream 3667 83744673 ~ 83744836 (+)
LOC110512947 NA coding upstream 111763 83586588 ~ 83639961 (+)
LOC110512943 LOC106602128 coding upstream 185516 83560090 ~ 83562987 (+)
LOC118936837 LOC106592595 coding upstream 191104 83540003 ~ 83557399 (+)
LOC118937005 NA coding downstream 2091 83791901 ~ 83792062 (+)
LOC118937007 NA coding downstream 3939 83793749 ~ 83793910 (+)
LOC118936953 NA coding downstream 5855 83795665 ~ 83795828 (+)
LOC118937119 NA coding downstream 7773 83797583 ~ 83797746 (+)
LOC118937120 NA coding downstream 9516 83799326 ~ 83799489 (+)
G930461 NA non-coding upstream 8589 83739627 ~ 83739914 (+)
G930459 NA non-coding upstream 9110 83739170 ~ 83739393 (+)
G930384 NA non-coding upstream 23205 83725078 ~ 83725298 (+)
G930377 NA non-coding upstream 46878 83700687 ~ 83701625 (+)
G930374 NA non-coding upstream 51347 83693390 ~ 83697156 (+)
G930466 NA non-coding downstream 28318 83818128 ~ 83830444 (+)
G930485 NA non-coding downstream 53977 83843787 ~ 83844002 (+)
G930486 NA non-coding downstream 54717 83844527 ~ 83848499 (+)
G930487 NA non-coding downstream 59034 83848844 ~ 83849076 (+)
G930498 NA non-coding downstream 80372 83870182 ~ 84086362 (+)
G929370 NA other upstream 713012 83035112 ~ 83035491 (+)
LOC110512617 n4bp2 other upstream 792172 82905730 ~ 82956331 (+)
LOC118936832 LOC105009164 other upstream 950181 82793509 ~ 82811450 (+)
G929305 NA other upstream 986015 82761605 ~ 82762488 (+)
LOC110518749 LOC106592297 other downstream 103784 83893530 ~ 83968790 (+)
LOC110516172 htt other downstream 204863 83981478 ~ 84112196 (+)
LOC110515513 LOC106594142 other downstream 346763 84130437 ~ 84282587 (+)
G930572 LOC106593948 other downstream 365129 84154939 ~ 84155714 (+)
G931108 LOC107756720 other downstream 886749 84676559 ~ 84677078 (+)

Expression


Co-expression Network