G930527


Basic Information

Item Value
gene id G930527
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 83922768 ~ 83923965 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1059926
ttgttgttgtttatatcctGTGATTGTCCTGTCAGTATGTAAGGGCCagctagatgttgttgttgttgttgtttatatcctGTGATTGTCCTGTCAGTCTGTAAGGGCCagctagatgttgttgttgttgtttatatcctGTGATTGTCCTGTCAGTCTGTAAGGGCCagctagatgttgttgttgttgtttatatcctGTGATTGTCCTGTCAGTCTAAGGGCCagctagatgttgttgttgtttatatcctGTGATTGTCCTGTCAGTCTAAGGGCCAGCTAGATGTtgttgttgttgtttatatcctGTGATTGTCCTGTCAGTCTGTAAGGGCCagctagatgttgttgttgttgtgttgttgttgtttatatcctGTGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1059926 True 385 lncRNA 0.41 2 83922768 83923965

Neighbor

gene id symbol gene type direction distance location
LOC118937032 NA coding upstream 86509 83836116 ~ 83836259 (+)
LOC118936954 NA coding upstream 89517 83833088 ~ 83833251 (+)
LOC118936944 NA coding upstream 91469 83831136 ~ 83831299 (+)
LOC118936943 NA coding upstream 93421 83829184 ~ 83829347 (+)
LOC118936958 NA coding upstream 95455 83827150 ~ 83827313 (+)
LOC118936843 NA coding downstream 26883 83950848 ~ 83953723 (+)
LOC110516172 htt coding downstream 57513 83981478 ~ 84112196 (+)
LOC118937093 NA coding downstream 125764 84049729 ~ 84049858 (+)
LOC118936845 NA coding downstream 191852 84115817 ~ 84118470 (+)
LOC110515513 LOC106594142 coding downstream 206472 84130437 ~ 84282587 (+)
G930523 NA non-coding upstream 3910 83912759 ~ 83918858 (+)
G930522 NA non-coding upstream 4901 83910549 ~ 83917867 (+)
G930501 NA non-coding upstream 41373 83880147 ~ 83881395 (+)
G930487 NA non-coding upstream 73692 83848844 ~ 83849076 (+)
G930486 NA non-coding upstream 74269 83844527 ~ 83848499 (+)
G930528 NA non-coding downstream 472 83924437 ~ 83945088 (+)
G930536 NA non-coding downstream 62086 83986051 ~ 83987850 (+)
G930543 NA non-coding downstream 101163 84025128 ~ 84028419 (+)
G930550 NA non-coding downstream 142591 84066556 ~ 84068955 (+)
G930508 NA non-coding downstream 190264 84114229 ~ 84114480 (+)
LOC110512947 NA other upstream 282807 83586588 ~ 83639961 (+)
G929370 NA other upstream 887277 83035112 ~ 83035491 (+)
LOC110512617 n4bp2 other upstream 966437 82905730 ~ 82956331 (+)
LOC118936832 LOC105009164 other upstream 1124446 82793509 ~ 82811450 (+)
G929305 NA other upstream 1160280 82761605 ~ 82762488 (+)
G930572 LOC106593948 other downstream 230974 84154939 ~ 84155714 (+)
G931108 LOC107756720 other downstream 752594 84676559 ~ 84677078 (+)
LOC110517086 LOC106590778 other downstream 1219355 85105137 ~ 85149776 (+)

Expression


Co-expression Network