G930561


Basic Information

Item Value
gene id G930561
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 84125807 ~ 84126206 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1059966
atctctctagtcacccccaaaaccaattctttctttggccgcctctctttccagttctctgctgccaatgactggaacgaactacaaaaatctctgaaactggaaacacttatctccctcactagctttaagcaccaactgtcagagcagctcacagattactgcacctgtacatagcccacctataatttagccctatcaactacctctttcccaactgtatttaattaatttatttattttgctcctttgcaccccattatttttatttatactttgcacattcttccattgcaaaactaccattccagtgttttacttgctatattgtatttaccttgccaccaaggccttttttgcctttacctcccttctcacctcatttgctcacattgtatat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1059966 True 400 lncRNA 0.40 1 84125807 84126206

Neighbor

gene id symbol gene type direction distance location
LOC118936845 NA coding upstream 7337 84115817 ~ 84118470 (+)
LOC110516172 htt coding upstream 13611 83981478 ~ 84112196 (+)
LOC118937093 NA coding upstream 75949 84049729 ~ 84049858 (+)
LOC110518749 LOC106592297 coding upstream 157017 83893530 ~ 83968790 (+)
LOC118936843 NA coding upstream 172084 83950848 ~ 83953723 (+)
LOC110515513 LOC106594142 coding downstream 4231 84130437 ~ 84282587 (+)
LOC118936846 LOC106597437 coding downstream 21706 84147912 ~ 84154174 (+)
LOC110514511 LOC105020822 coding downstream 161172 84287378 ~ 84347895 (+)
LOC118936847 LOC106610425 coding downstream 289014 84415220 ~ 84425010 (+)
LOC118936848 LOC106610425 coding downstream 307714 84433920 ~ 84446516 (+)
G930508 NA non-coding upstream 11327 84114229 ~ 84114480 (+)
G930550 NA non-coding upstream 56852 84066556 ~ 84068955 (+)
G930543 NA non-coding upstream 97388 84025128 ~ 84028419 (+)
G930536 NA non-coding upstream 137957 83986051 ~ 83987850 (+)
G930577 NA non-coding downstream 30569 84156775 ~ 84156982 (+)
G930586 NA non-coding downstream 56758 84182964 ~ 84183346 (+)
G930587 NA non-coding downstream 57437 84183643 ~ 84184846 (+)
G930589 NA non-coding downstream 66032 84192238 ~ 84192729 (+)
LOC110512947 NA other upstream 485846 83586588 ~ 83639961 (+)
G929370 NA other upstream 1090316 83035112 ~ 83035491 (+)
LOC110512617 n4bp2 other upstream 1169476 82905730 ~ 82956331 (+)
G930572 LOC106593948 other downstream 28733 84154939 ~ 84155714 (+)
G931108 LOC107756720 other downstream 550353 84676559 ~ 84677078 (+)
LOC110517086 LOC106590778 other downstream 1017114 85105137 ~ 85149776 (+)
LOC110515429 LOC106610570 other downstream 1071809 85198005 ~ 85221752 (+)

Expression


Co-expression Network