G930595


Basic Information

Item Value
gene id G930595
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 84209964 ~ 84212141 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1060006
aggagactccatctattggacagagtggaggagactccgtctattggacagagtggaggagactccgtctattggacagagtggaggagactccgtctattggacagagtgggtgtgtgtctagacagcattgagaatagaaggagactcccgtctattggacagagtgggtgtgtgtctagacagcattgagaatagaaggagactccgtctattggacagagtgggtgtgtgtctagacagcattgagaatagaaggagactccgtctattggacagagtgggtgtgtgtctagacAGCATTGAGAATAGAAGGAGACTGAAGAATGTaaacctttttattatgttttcacaAGGACCTGTTTTGATTCTGGATGAAATGGAGTTAGTCTGACTCACGTGTGTCTGTTCAGGGAAGGCTGGAGTTTGtacatctctgtgtgtctctgtgtgaggtCTGAATCAGGTCTGAATCAGGTCTTGTGATTTGGCTAATTCATAGCCGTGTGCGCACACACATTTCTGAATCAGCAGTCTTAGCCAGAAACAGACGTTTTGATGCAGAAagtggggcagagggagaggaagagaggagaagaggagaggagagagaggagaagagtagagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1060006 True 628 lncRNA 0.47 3 84209964 84212141

Neighbor

gene id symbol gene type direction distance location
LOC118936846 LOC106597437 coding upstream 56400 84147912 ~ 84154174 (+)
LOC118936845 NA coding upstream 91494 84115817 ~ 84118470 (+)
LOC110516172 htt coding upstream 97768 83981478 ~ 84112196 (+)
LOC118937093 NA coding upstream 160106 84049729 ~ 84049858 (+)
LOC118936843 NA coding upstream 256241 83950848 ~ 83953723 (+)
LOC110514511 LOC105020822 coding downstream 75237 84287378 ~ 84347895 (+)
LOC118936847 LOC106610425 coding downstream 203079 84415220 ~ 84425010 (+)
LOC118936848 LOC106610425 coding downstream 221779 84433920 ~ 84446516 (+)
LOC110517443 LOC106610425 coding downstream 241490 84453631 ~ 84465566 (+)
LOC110513002 LOC106610425 coding downstream 259451 84471592 ~ 84502188 (+)
G930593 NA non-coding upstream 3784 84203633 ~ 84206180 (+)
G930592 NA non-coding upstream 8100 84201021 ~ 84201864 (+)
G930589 NA non-coding upstream 17235 84192238 ~ 84192729 (+)
G930587 NA non-coding upstream 25118 84183643 ~ 84184846 (+)
G930586 NA non-coding upstream 26618 84182964 ~ 84183346 (+)
G930600 NA non-coding downstream 9667 84221808 ~ 84223200 (+)
G930605 NA non-coding downstream 17429 84229570 ~ 84235716 (+)
G930610 NA non-coding downstream 30509 84242650 ~ 84242984 (+)
LOC110515513 LOC106594142 non-coding downstream 36113 84130437 ~ 84282587 (+)
G930616 NA non-coding downstream 61234 84273375 ~ 84273964 (+)
G930572 LOC106593948 other upstream 54250 84154939 ~ 84155714 (+)
LOC110518749 LOC106592297 other upstream 263337 83893530 ~ 83968790 (+)
LOC110512947 NA other upstream 570003 83586588 ~ 83639961 (+)
G931108 LOC107756720 other downstream 464418 84676559 ~ 84677078 (+)
LOC110517086 LOC106590778 other downstream 931179 85105137 ~ 85149776 (+)
LOC110515429 LOC106610570 other downstream 985874 85198005 ~ 85221752 (+)
LOC110515949 LOC106591060 other downstream 1120415 85236443 ~ 85448659 (+)
G931587 NA other downstream 1262145 85474286 ~ 85475128 (+)

Expression


Co-expression Network