G931091


Basic Information

Item Value
gene id G931091
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 84663548 ~ 84667835 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1060712
ccacagggtttgaacagggCCCATAGggtttgaacagggcccatagggtttgaacagggcccatagggtttgaacaggacccatagggtttgaacagggcccatagggtttgaacaggacccatagggtttgaacaggacccatagggtttgAACAggcttctggtcaaaagtaggtcaCTACTCAGggagtagggtgtcatttggaactgACCCACTAACTGTAATGTGATTTTTGGGGACTTTGGGGGACAGAAGGGCTCTTTTGCTAACTGTCTCAGTCGATAGCAACAAAGATGTTTATGTCCGAAAAACAACATAAATTCACCCAAatcatgttccattattaaggCTTCTAGTGTTCTACCCTCAGCAGTGAAGAAAAGGCccctccatattccctatgtcccctggttaaaagcagtgatctccatattccctatggtctctggagcagtgacctccatattccccatggtctctggagcagtgacctccatattccctatggtctctggagcagtgacctccatattccctatggtctctggagcagtgacctccatattccctatggtctctggttaaaagcagtgacctccatattccctatggtctctggagcagtgacctccatattccctatggtctctggagcagtgacctccatattccctatgtcccctggtta
>TU1060713
ccacagggtttgaacagggCCCATAGggtttgaacagggcccatagggtttgaacagggcccatagggtttgaacaggacccatagggtttgaacagggcccatagggtttgaacaggacccatagggtttgaacaggacccatagggtttgAACAggcttctggtcaaaagtaggtcaCTACTCAGggagtagggtgtcatttggaactgACCCACTAACTGTAATGTGATTTTTGGGGACTTTGGGGGACAGAAGGGCTCTTTTGCTAACTGTCTCAGTCGATAGCAACAAAGATGTTTATGTCCGAAAAACAACATAAATTCACCCAAatcatgttccattattaaggCTTCTAGTGTTCTACCCTCAGCAGTGAAGAAAAGGCcccctccgtattccctatggtctctggagcagtgacctccatattccctctggtctctggttaaaagcagtgacctccatattccctatggtctctggagcagtgacctccatattccctatggtctctggttaaaagcagtgacctccatattccctatggtctctggagcagtgacctccatattccctatggtctctggagcagtgacctccatattccctatggtctctgga

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1060712 False 690 lncRNA 0.48 2 84663548 84664257
TU1060713 True 623 lncRNA 0.48 3 84663548 84667835

Neighbor

gene id symbol gene type direction distance location
LOC110514534 LOC106610412 coding upstream 3170 84654783 ~ 84660378 (+)
LOC110513002 LOC106610425 coding upstream 161360 84471592 ~ 84502188 (+)
LOC110517443 LOC106610425 coding upstream 197982 84453631 ~ 84465566 (+)
LOC118936848 LOC106610425 coding upstream 217032 84433920 ~ 84446516 (+)
LOC118936847 LOC106610425 coding upstream 238538 84415220 ~ 84425010 (+)
LOC110498551 LOC106610561 coding downstream 167441 84835276 ~ 84841096 (+)
LOC110516354 LOC106610426 coding downstream 176133 84843532 ~ 84846806 (+)
LOC110517086 LOC106590778 coding downstream 437302 85105137 ~ 85149776 (+)
LOC110515429 LOC106610570 coding downstream 530170 85198005 ~ 85221752 (+)
LOC110515949 LOC106591060 coding downstream 568608 85236443 ~ 85448659 (+)
G931078 NA non-coding upstream 20442 84642899 ~ 84643106 (+)
G931077 NA non-coding upstream 20733 84642609 ~ 84642815 (+)
G930725 NA non-coding upstream 57001 84540559 ~ 84606547 (+)
G930698 NA non-coding upstream 75939 84481430 ~ 84587609 (+)
G930696 NA non-coding upstream 126681 84525372 ~ 84536867 (+)
G931095 NA non-coding downstream 126 84667961 ~ 84669673 (+)
G931096 NA non-coding downstream 2034 84669869 ~ 84670167 (+)
G931104 NA non-coding downstream 3365 84671200 ~ 84671432 (+)
G931110 NA non-coding downstream 9493 84677328 ~ 84677706 (+)
G931121 NA non-coding downstream 34402 84702237 ~ 84703282 (+)
G930572 LOC106593948 other upstream 507834 84154939 ~ 84155714 (+)
LOC110515513 LOC106594142 other upstream 517874 84130437 ~ 84282587 (+)
LOC110516172 htt other upstream 654117 83981478 ~ 84112196 (+)
LOC110518749 LOC106592297 other upstream 716921 83893530 ~ 83968790 (+)
LOC110512947 NA other upstream 1023587 83586588 ~ 83639961 (+)
G931108 LOC107756720 other downstream 8724 84676559 ~ 84677078 (+)
G931587 NA other downstream 806451 85474286 ~ 85475128 (+)

Expression


Co-expression Network