G931095


Basic Information

Item Value
gene id G931095
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 84667961 ~ 84669673 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1060722
ctctggagcagtgacctccatattccctatggtctctggagcagtgacctccatattccctatggtccctggagcagtgacctccatattGAAAAGGGGATCATTTGCAACCaggtctcacagtctcactgcggaattagacgttcatccctGTTTCCCAAACGTCACATTTTGAAGTGTTTGGTTACTTCGTTCCTTATCGTTCGACGGTTAAGgttgacttgccaagttaaataaaggttcaattaaaaataaatacaaataaaagGTTAGTCATTAACTGCTAAATCTTAAGGTTTTAGTCATTATTTCCTAATTCTTCAGGTTAGTCATTAACTGCTAATTCTTAAGGTTTTAGTCATTATCTCCTAATTCTTCAGGTTAGTCATTAACTGCTAAATCTTAAGGTTCTGTCATTATCTCCTAATTCTTCAGGTTAGTCATTAACTGCTAAATCTTAAGGTTCAGTCATTATCTCCTAATTCTTCAGGTTAGGCATTATTTCCCAAATCTtcagtttagacattaactcctAATTCTTCAGGTTAGGCATTATCTCGTAATTCTTCAGGTTAGGCATTATCTCCTAATTCTTAAGGTTTAGGCATTATCTCCTAATTCTTCAGGTTAGGCATTATCTCCCAAATCTtcagtttagacattaactcctATTTCTTCAGGTTAGGCATTATCTCGTAATTCTTCAGGTTAGTCATTATCTCCTAATTCTTCAGTTTAGTCATGATCTCCTAAGCCTAGTGACCAGTTTCCACATCTTCTCCTCAGACATGGGTGAACGTCGAATACCATTTTGTATCACCCGAATGTTAATGGTTCTGCTCTCCTCTGTTAAAACCACATGGAATAAGCTACtgtgcagtgtgtatgtgtgtgtgtgcactgtgtgtgtgtgtgtgcagtgtttgTGCGTAAGTGAAAGAgaaagggtgtgagagagagagagaggttgagagattGAGCGTGAGAGattgagggtgagagagggagagagagagagagggagagagggtgagtaaGTGTTTTCAGAATGTGAGTTTCGCCTTCTCCCAGCTGCTagatgaaatgtgtgtgtgtgtgtgtgtcagcgtgcgTTCGTGCgactccagtgtgtgtgagcatgcgactgcactgtgtgtttgtgagtgttcgTGCGACTGCAGTGTGTGAGGCTGAGAACACCCTACCACTCTCTGGGgagtgtctgtatcagtgtgtggaacttcagtgtgtgttagtgtgtgtgaatgtgtgtatgtctgttagtgtgtgtgtgcctgttagtgtgtgtgtgcctgttagtgtgtgtgtgcctgttagtgtgtgtatgtctcgctctctctctggagagTGAATGCATCAGTGGAGGAGTCTAAACTACTATTCTGTGACTCTCAATTTATCATCCTATTGTCATCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1060722 True 1439 lncRNA 0.42 3 84667961 84669673

Neighbor

gene id symbol gene type direction distance location
LOC110514534 LOC106610412 coding upstream 7583 84654783 ~ 84660378 (+)
LOC110513002 LOC106610425 coding upstream 165773 84471592 ~ 84502188 (+)
LOC110517443 LOC106610425 coding upstream 202395 84453631 ~ 84465566 (+)
LOC118936848 LOC106610425 coding upstream 221445 84433920 ~ 84446516 (+)
LOC118936847 LOC106610425 coding upstream 242951 84415220 ~ 84425010 (+)
LOC110498551 LOC106610561 coding downstream 165603 84835276 ~ 84841096 (+)
LOC110516354 LOC106610426 coding downstream 174295 84843532 ~ 84846806 (+)
LOC110517086 LOC106590778 coding downstream 435464 85105137 ~ 85149776 (+)
LOC110515429 LOC106610570 coding downstream 528332 85198005 ~ 85221752 (+)
LOC110515949 LOC106591060 coding downstream 566770 85236443 ~ 85448659 (+)
G931091 NA non-coding upstream 126 84663548 ~ 84667835 (+)
G931078 NA non-coding upstream 24855 84642899 ~ 84643106 (+)
G931077 NA non-coding upstream 25146 84642609 ~ 84642815 (+)
G930725 NA non-coding upstream 61414 84540559 ~ 84606547 (+)
G930698 NA non-coding upstream 80352 84481430 ~ 84587609 (+)
G931096 NA non-coding downstream 196 84669869 ~ 84670167 (+)
G931104 NA non-coding downstream 1527 84671200 ~ 84671432 (+)
G931110 NA non-coding downstream 7655 84677328 ~ 84677706 (+)
G931121 NA non-coding downstream 32564 84702237 ~ 84703282 (+)
G931144 NA non-coding downstream 78647 84748320 ~ 84748908 (+)
G930572 LOC106593948 other upstream 512247 84154939 ~ 84155714 (+)
LOC110515513 LOC106594142 other upstream 522287 84130437 ~ 84282587 (+)
LOC110516172 htt other upstream 658530 83981478 ~ 84112196 (+)
LOC110518749 LOC106592297 other upstream 721334 83893530 ~ 83968790 (+)
LOC110512947 NA other upstream 1028000 83586588 ~ 83639961 (+)
G931108 LOC107756720 other downstream 6886 84676559 ~ 84677078 (+)
G931587 NA other downstream 804613 85474286 ~ 85475128 (+)

Expression


Co-expression Network