G931149


Basic Information

Item Value
gene id G931149
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 84822283 ~ 84822800 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1060783
ATAATCATTACCAACTGACAGGCCTGTGTTATAATCATTACCAACTGACAGAAGGTGTTATAATCATTACCAACTGACAGAACGTGTTATAATCATTACCAACTGACAGAAGGTGTTATAATCATTATCAACTGACAGAAGGTGTTATAATCATTACCAACTGACAGGCCAGTGTTATAATCATTACCAACTGACAGAAGGTGTTATAATCATTATCAACTGACAGAAGGTGTTATAATCATTACCAACTGACAG
>TU1060784
ATAATCATTACCAACTGACAGGCCTGTGTTATAATCATTACCAACTGACAGAAGGTGTTATAATCATTACCAACTGACAGAACGTGTTATAATCATTACCAACTGACAGAAGGTGTTATAATCATTACCAACTGACAGGCCCGTGTTATAATCATTACCAACTGACAGAAGGTGTTATAATCATTACCAACTGACAGGCCTGTGTTATAATCATTACCAACTGAAAGAAGGTGTTATAACCATTACCAACTGACAGAAGGTGTTATAATCATTACCAACTGACAGGAGGTGTTATAATCATTACCAACTGACATAAGGTGTTATAATCATTACCAACTGACAGGCCAGTGTTATAATCATTACCAACTGACAGAAGGTGTTATAATCATTATCAACTGACAGAAGGTGTTATAATCATTACCAACTGACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1060783 False 255 lncRNA 0.35 2 84822283 84822800
TU1060784 True 431 lncRNA 0.36 2 84822283 84822800

Neighbor

gene id symbol gene type direction distance location
LOC110514534 LOC106610412 coding upstream 161905 84654783 ~ 84660378 (+)
LOC110513002 LOC106610425 coding upstream 320095 84471592 ~ 84502188 (+)
LOC110517443 LOC106610425 coding upstream 356717 84453631 ~ 84465566 (+)
LOC118936848 LOC106610425 coding upstream 375767 84433920 ~ 84446516 (+)
LOC118936847 LOC106610425 coding upstream 397273 84415220 ~ 84425010 (+)
LOC110498551 LOC106610561 coding downstream 12476 84835276 ~ 84841096 (+)
LOC110516354 LOC106610426 coding downstream 21168 84843532 ~ 84846806 (+)
LOC110517086 LOC106590778 coding downstream 282337 85105137 ~ 85149776 (+)
LOC110515429 LOC106610570 coding downstream 375205 85198005 ~ 85221752 (+)
LOC110515949 LOC106591060 coding downstream 413643 85236443 ~ 85448659 (+)
G931144 NA non-coding upstream 73375 84748320 ~ 84748908 (+)
G931121 NA non-coding upstream 119001 84702237 ~ 84703282 (+)
G931110 NA non-coding upstream 144577 84677328 ~ 84677706 (+)
G931104 NA non-coding upstream 150851 84671200 ~ 84671432 (+)
G931096 NA non-coding upstream 152116 84669869 ~ 84670167 (+)
G931145 NA non-coding downstream 15619 84838419 ~ 84839210 (+)
G931160 NA non-coding downstream 18873 84841673 ~ 84842033 (+)
G931161 NA non-coding downstream 19404 84842204 ~ 84842418 (+)
G931162 NA non-coding downstream 19778 84842578 ~ 84842858 (+)
G931163 NA non-coding downstream 20102 84842902 ~ 84843506 (+)
G931108 LOC107756720 other upstream 145205 84676559 ~ 84677078 (+)
G930572 LOC106593948 other upstream 666569 84154939 ~ 84155714 (+)
LOC110515513 LOC106594142 other upstream 676609 84130437 ~ 84282587 (+)
LOC110516172 htt other upstream 812852 83981478 ~ 84112196 (+)
LOC110518749 LOC106592297 other upstream 875656 83893530 ~ 83968790 (+)
G931587 NA other downstream 651486 85474286 ~ 85475128 (+)
G931588 NA other downstream 652821 85475621 ~ 85476131 (+)

Expression


Co-expression Network