G931478


Basic Information

Item Value
gene id G931478
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 85349551 ~ 85349857 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1061312
CATTATCACTTCTATAATACATTCTGGGGGTATTCTATAGCTATGTGTTCTAGAATAACATCACTTCTATAATACATTCTGGGGGGGATTCTATAGCTATGTGTTCTAGAATAACATcacatctataatacattctGGGGGGATTCTATAGCTATGTGTTCTAGAATAACATTATCACTTCTATAATACATTCTGGGGGGGATTCTATAGCTATGTGTTCTAGAATAACATGATCACTACTATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1061312 True 245 lncRNA 0.34 2 85349551 85349857

Neighbor

gene id symbol gene type direction distance location
LOC110515429 LOC106610570 coding upstream 131808 85198005 ~ 85221752 (+)
LOC110517086 LOC106590778 coding upstream 199775 85105137 ~ 85149776 (+)
LOC110516354 LOC106610426 coding upstream 502745 84843532 ~ 84846806 (+)
LOC110498551 LOC106610561 coding upstream 508455 84835276 ~ 84841096 (+)
LOC110514534 LOC106610412 coding upstream 689173 84654783 ~ 84660378 (+)
trnae-cuc-167 NA coding downstream 106567 85456424 ~ 85456495 (+)
LOC118936854 NA coding downstream 116319 85464789 ~ 85466981 (+)
LOC110513232 LOC106594638 coding downstream 122306 85472163 ~ 85594820 (+)
LOC110510945 LOC106591917 coding downstream 214314 85564171 ~ 85594820 (+)
LOC118966668 LOC106592313 coding downstream 543997 85893094 ~ 85950607 (+)
G931474 NA non-coding upstream 12608 85336137 ~ 85336943 (+)
G931467 NA non-coding upstream 38266 85310697 ~ 85311285 (+)
G931464 NA non-coding upstream 47833 85301015 ~ 85301718 (+)
G931455 NA non-coding upstream 80510 85268463 ~ 85269041 (+)
G931454 NA non-coding upstream 89259 85260058 ~ 85260292 (+)
G931493 NA non-coding downstream 83106 85432963 ~ 85433605 (+)
G931494 NA non-coding downstream 87500 85437357 ~ 85445000 (+)
LOC110515949 LOC106591060 non-coding downstream 98497 85236443 ~ 85448659 (+)
G931436 NA non-coding downstream 100673 85450530 ~ 85451295 (+)
G931568 NA non-coding downstream 104050 85453907 ~ 85455663 (+)
G931108 LOC107756720 other upstream 672473 84676559 ~ 84677078 (+)
G930572 LOC106593948 other upstream 1193837 84154939 ~ 84155714 (+)
G931587 NA other downstream 124429 85474286 ~ 85475128 (+)
G931588 NA other downstream 125764 85475621 ~ 85476131 (+)
G931574 LOC106591917 other downstream 166741 85516598 ~ 85592174 (+)
G931571 LOC106592710 other downstream 174099 85523956 ~ 85594973 (+)

Expression


Co-expression Network