G931704


Basic Information

Item Value
gene id G931704
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 85708524 ~ 85710123 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1061675
gggcacaaaataaactgaaaccaaaacaaacagcaaatgtatCCAACCGGTTTGTAGATTCAAAGATCAAATACTAAATGTTTgattactttaatacacatatccAAATACTTTTGGTTCACTAAAACGGGTGGActaaacagttcacctgacacaccCATCTGTTTCGCCTCCCAGGAAAGTTCCCGACGGTTCCGTTACCGAGTTCCTACCGAGAGTATCCAAAGTCTGCCGATTCATCTCTTCTTCCCGAGCTGATGCAACTAGGCAGGGCCAGCCGAACGGCGATACATACATACGAAGAGTCAGAGAACTTACTCACAACCCTTTTCATGCTGTGGGGGAACCAGTCAAAATCTCTCCAGATACTCATcgactctggggccgatgagagttttatggacgctaccctggtgtctgagctgaacatccccactcaacccctctccattcccatggatgttagagcCCTTGGTGGGCactctataggccgggtcactCATAATACTCATCAACCTACGGGAACCACAACGATACAATCCAATTCCTGCTAATtaagtctcctcaggttcccgtggtattgggaATATATTGGCTCCATCGACACAATCAAATAAAatttcaaaaatcaaatcaaatgtatttatatagcccttcttacatcagctgatatctcaaagtgctgtacagaaacctagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggttaggaaaaactccctagaaaggccaaaccctaggaagaaacctagagaggaaccagcctataagggttggccagtcctcttctggctgtgccgggtggagattataacagaacatggcaagatgttcaaatgttcataaatgaccagcatggtcaaataataataatcacagtagttgttgagggtgcagccAGTCAGCACTTCAGGAGTAACTGTCAGTTGGCTTTTAATAGGCGATCATTacgagtatctctaccgctcctgctgtctctagagagttgaaaacagcaggtctgggacaggtagcacgtcctgtaaacaggtcagggttccatagccacagaccgtttaaactggagcagcagcacggccaggtaaggagtcatcatgccaggtagtcctgaggcatggtcttagggctcaggtcctccaagagagaaagaaaaagagagagaaagaaagacagaattagagagagcatacttaaattcacacaggacactggataagacaggagaagtactccagatataacaaactgaccctagccccccgacacaaactactgcagcataaatattggAGGTTGAGACagtaggggtcaggagacactgtggccccatccgatgatacccccggacagggccaaacaggaaggatataaccccacacagttttccaaagcacagcccccacaccactagagggatatcttcaaccaccaacttaccatcctgaggcaAGGCCGagaatagcccacaaagatctcagccacggcacaacccaaggggagggacgccaacccagacaggaagatcacgtcattgactcaacccactcaagtgacgcacccct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1061675 True 1600 lncRNA 0.47 1 85708524 85710123

Neighbor

gene id symbol gene type direction distance location
LOC110513232 LOC106594638 coding upstream 113704 85472163 ~ 85594820 (+)
LOC110510945 LOC106591917 coding upstream 113704 85564171 ~ 85594820 (+)
LOC118936854 NA coding upstream 241543 85464789 ~ 85466981 (+)
trnae-cuc-167 NA coding upstream 252029 85456424 ~ 85456495 (+)
LOC110515949 LOC106591060 coding upstream 259865 85236443 ~ 85448659 (+)
LOC118966668 LOC106592313 coding downstream 183731 85893094 ~ 85950607 (+)
LOC118936495 LOC106594836 coding downstream 190433 85900556 ~ 85920664 (+)
LOC110516966 LOC106591460 coding downstream 219034 85929157 ~ 85945181 (+)
LOC110528615 LOC106597603 coding downstream 240907 85951030 ~ 85957092 (+)
LOC118966669 LOC106591460 coding downstream 284413 85994536 ~ 86008800 (+)
G931703 NA non-coding upstream 74 85707383 ~ 85708450 (+)
G931702 NA non-coding upstream 1194 85706886 ~ 85707330 (+)
G931699 NA non-coding upstream 12919 85695245 ~ 85695605 (+)
G931696 NA non-coding upstream 14806 85693065 ~ 85693718 (+)
G931691 NA non-coding upstream 60261 85647995 ~ 85648263 (+)
G931705 NA non-coding downstream 406 85710529 ~ 85710824 (+)
G931709 NA non-coding downstream 9186 85719309 ~ 85720083 (+)
G931711 LOC106597193 non-coding downstream 12243 85722366 ~ 85723702 (+)
G931712 LOC106610364 non-coding downstream 13893 85724016 ~ 85725204 (+)
G931713 LOC106593240 non-coding downstream 15978 85726101 ~ 85726445 (+)
G931571 LOC106592710 other upstream 183483 85523956 ~ 85594973 (+)
G931574 LOC106591917 other upstream 188680 85516598 ~ 85592174 (+)
G931588 NA other upstream 232393 85475621 ~ 85476131 (+)
G931587 NA other upstream 233396 85474286 ~ 85475128 (+)
G931776 NA other downstream 75377 85785500 ~ 85786498 (+)
LOC110528614 LOC106592313 other downstream 301676 86008932 ~ 86017575 (+)

Expression


Co-expression Network