G931713 (LOC106593240)


Basic Information

Item Value
gene id G931713
gene name LOC106593240
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 85726101 ~ 85726445 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1061688
actgtagtattctaagTGTTATTATTTGTTCATATTGGCACTCACCTGAGCTTGTTGATATTTGGTAGACACTTTAAAATGGTTTTGCTGAGAGCTTCACTGAGAACAGTTCTCTGATCCCAGTGTAGACAGAGATTAACCCTCTCTAGACTCTGCTTCATCACTTCTTCTGCTCTCTCAAACACTCGTCTTTCACCCTGGACTGGAAGGTGCAACTCCTTTCCACGGAGACCAAGTAAAGTGGTGAAATCCATCTGTGTCTCACTGCTCAGCAAAGTTGTCCAGAGTTGATAGAGCATTGAGGGGTCAGATGAATCATCAGAGGATGGTCTTTAAATAATAGAT

Function

NR:

description
uncharacterized protein LOC110510944

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1061688 True 345 lncRNA 0.42 1 85726101 85726445

Neighbor

gene id symbol gene type direction distance location
LOC110513232 LOC106594638 coding upstream 131281 85472163 ~ 85594820 (+)
LOC110510945 LOC106591917 coding upstream 131281 85564171 ~ 85594820 (+)
LOC118936854 NA coding upstream 259120 85464789 ~ 85466981 (+)
trnae-cuc-167 NA coding upstream 269606 85456424 ~ 85456495 (+)
LOC110515949 LOC106591060 coding upstream 277442 85236443 ~ 85448659 (+)
LOC118966668 LOC106592313 coding downstream 167409 85893094 ~ 85950607 (+)
LOC118936495 LOC106594836 coding downstream 174111 85900556 ~ 85920664 (+)
LOC110516966 LOC106591460 coding downstream 202712 85929157 ~ 85945181 (+)
LOC110528615 LOC106597603 coding downstream 224585 85951030 ~ 85957092 (+)
LOC118966669 LOC106591460 coding downstream 268091 85994536 ~ 86008800 (+)
G931712 LOC106610364 non-coding upstream 897 85724016 ~ 85725204 (+)
G931711 LOC106597193 non-coding upstream 2399 85722366 ~ 85723702 (+)
G931709 NA non-coding upstream 6018 85719309 ~ 85720083 (+)
G931705 NA non-coding upstream 15277 85710529 ~ 85710824 (+)
G931704 NA non-coding upstream 15978 85708524 ~ 85710123 (+)
G931714 LOC106592710 non-coding downstream 97 85726542 ~ 85728482 (+)
G931715 NA non-coding downstream 2132 85728577 ~ 85729326 (+)
G931716 NA non-coding downstream 3267 85729712 ~ 85730001 (+)
G931721 NA non-coding downstream 15273 85741718 ~ 85742072 (+)
G931755 NA non-coding downstream 32937 85759382 ~ 85761491 (+)
G931571 LOC106592710 other upstream 201060 85523956 ~ 85594973 (+)
G931574 LOC106591917 other upstream 206257 85516598 ~ 85592174 (+)
G931588 NA other upstream 249970 85475621 ~ 85476131 (+)
G931587 NA other upstream 250973 85474286 ~ 85475128 (+)
G931776 NA other downstream 59055 85785500 ~ 85786498 (+)
LOC110528614 LOC106592313 other downstream 285354 86008932 ~ 86017575 (+)

Expression


Co-expression Network