G931820 (LOC107756720)


Basic Information

Item Value
gene id G931820
gene name LOC107756720
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 85905328 ~ 85910310 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1061848
tatactctctgtcggctcccgaacgtaaggctctcgaagattatttgtctgtagctcttgccgccggtaccatagtcccctcctcctctcccgccggagcggggttttttttgttaagaagaaggacgggtccctgcgcccctgcatagattatcgagggctgaatgacataacagtgaagaatcgttatccgcttcctcttatgtcttcagccttcgagatcctgcagggagccaggttattcactaagttggaccttcgtaacgcttaccatctcgtgcgcatcagggagggggacgagtggaagacggcgtttaacactccgttagg

Function

NR:

description
PREDICTED: uncharacterized protein LOC109045530

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1061848 True 330 lncRNA 0.53 2 85905328 85910310

Neighbor

gene id symbol gene type direction distance location
LOC110513232 LOC106594638 coding upstream 310508 85472163 ~ 85594820 (+)
LOC110510945 LOC106591917 coding upstream 310508 85564171 ~ 85594820 (+)
LOC118936854 NA coding upstream 438347 85464789 ~ 85466981 (+)
trnae-cuc-167 NA coding upstream 448833 85456424 ~ 85456495 (+)
LOC110515949 LOC106591060 coding upstream 456669 85236443 ~ 85448659 (+)
LOC110516966 LOC106591460 coding downstream 18847 85929157 ~ 85945181 (+)
LOC110528615 LOC106597603 coding downstream 40720 85951030 ~ 85957092 (+)
LOC118966669 LOC106591460 coding downstream 84226 85994536 ~ 86008800 (+)
LOC110528614 LOC106592313 coding downstream 98622 86008932 ~ 86017575 (+)
LOC118936859 LOC106595358 coding downstream 241693 86152003 ~ 86182526 (+)
G931816 NA non-coding upstream 16874 85887755 ~ 85888454 (+)
G931814 NA non-coding upstream 19907 85884502 ~ 85885421 (+)
G931794 NA non-coding upstream 57067 85847794 ~ 85848261 (+)
G931786 NA non-coding upstream 90027 85814991 ~ 85815301 (+)
G931780 NA non-coding upstream 106881 85796556 ~ 85798447 (+)
LOC118936495 LOC106594836 non-coding downstream 7613 85900556 ~ 85920664 (+)
G931826 NA non-coding downstream 24604 85934914 ~ 85938326 (+)
G931827 NA non-coding downstream 25310 85935620 ~ 85938812 (+)
G931831 NA non-coding downstream 46400 85956710 ~ 86016970 (+)
G931832 NA non-coding downstream 49400 85959710 ~ 86011112 (+)
LOC118966668 LOC106592313 other upstream 10591 85893094 ~ 85950607 (+)
G931776 NA other upstream 118830 85785500 ~ 85786498 (+)
G931571 LOC106592710 other upstream 380287 85523956 ~ 85594973 (+)
G931574 LOC106591917 other upstream 385484 85516598 ~ 85592174 (+)
LOC110513338 LOC106595035 other downstream 290888 86201044 ~ 86209191 (+)
G932184 NA other downstream 532740 86441024 ~ 86475840 (+)
LOC110518842 tbc1d1 other downstream 813627 86704406 ~ 86830606 (+)

Expression


Co-expression Network