G932067 (LOC106595295)


Basic Information

Item Value
gene id G932067
gene name LOC106595295
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 86342719 ~ 86342939 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1062197
ggCTCCACTCGGAGCGTATCTGCCACTCGCTGCAGATCTTTAGCTGACAGGGCGATGTCGTCTCCGGCCTATCATAACCTCCGCACTGCGCCATCTCCACGGCGACCACCGTTGCCGTACTGTTGCCATGTTTACGGAGAGCCTGACGACAGATGACCTGGCGTTGCTGGGTCCCCGGGCCGCAGGTTCTAGTGCACTCTGACCACTCCCCCAGGTCCCAG

Function

NR:

description
PREDICTED: thrombospondin type-1 domain-containing protein 4-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1062197 True 221 lncRNA 0.62 1 86342719 86342939

Neighbor

gene id symbol gene type direction distance location
LOC118936864 NA coding upstream 6189 86334061 ~ 86336728 (+)
LOC118936863 LOC104951401 coding upstream 18889 86287581 ~ 86323830 (+)
LOC110514691 uba6 coding upstream 57071 86230780 ~ 86285648 (+)
LOC118936862 NA coding upstream 84244 86257257 ~ 86258475 (+)
LOC110513338 LOC106595035 coding upstream 133528 86201044 ~ 86209191 (+)
LOC110514239 LOC106594008 coding downstream 25880 86368819 ~ 86395066 (+)
LOC118936865 NA coding downstream 52254 86395193 ~ 86396534 (+)
LOC118936866 NA coding downstream 62518 86405457 ~ 86409872 (+)
LOC118936868 NA coding downstream 232526 86575465 ~ 86671952 (+)
pgm2 pgm2 coding downstream 333651 86676590 ~ 86696929 (+)
G932065 NA non-coding upstream 3257 86339242 ~ 86339462 (+)
G932063 NA non-coding upstream 9462 86332630 ~ 86333257 (+)
G932062 NA non-coding upstream 26982 86315434 ~ 86315737 (+)
G932061 NA non-coding upstream 28169 86314345 ~ 86314550 (+)
G932069 NA non-coding downstream 1604 86344543 ~ 86344842 (+)
G932070 NA non-coding downstream 2985 86345924 ~ 86346134 (+)
G932071 NA non-coding downstream 5346 86348285 ~ 86349033 (+)
G932073 NA non-coding downstream 14612 86357551 ~ 86358364 (+)
G932075 NA non-coding downstream 23280 86366219 ~ 86366503 (+)
LOC110528614 LOC106592313 other upstream 330178 86008932 ~ 86017575 (+)
LOC110528615 LOC106597603 other upstream 390046 85951030 ~ 85957092 (+)
LOC118936495 LOC106594836 other upstream 440107 85900556 ~ 85920664 (+)
LOC118966668 LOC106592313 other upstream 447982 85893094 ~ 85950607 (+)
G932184 NA other downstream 100111 86441024 ~ 86475840 (+)
LOC110518842 tbc1d1 other downstream 380998 86704406 ~ 86830606 (+)
LOC110511479 klhl5 other downstream 654847 86997786 ~ 87054035 (+)
LOC110516832 wdr19 other downstream 776143 87057752 ~ 87129649 (+)
G932422 NA other downstream 852580 87195519 ~ 87288556 (+)

Expression


Co-expression Network