Gene
RNA
| Item | Value |
|---|---|
| gene id | G932071 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 86348285 ~ 86349033 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106599037, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1062201 | False | 552 | lncRNA | 0.42 | 3 | 86348285 | 86349033 |
| TU1062202 | True | 403 | lncRNA | 0.42 | 4 | 86348285 | 86349033 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936864 | NA | coding | upstream | 11755 | 86334061 ~ 86336728 (+) |
| LOC118936863 | LOC104951401 | coding | upstream | 24455 | 86287581 ~ 86323830 (+) |
| LOC110514691 | uba6 | coding | upstream | 62637 | 86230780 ~ 86285648 (+) |
| LOC118936862 | NA | coding | upstream | 89810 | 86257257 ~ 86258475 (+) |
| LOC110513338 | LOC106595035 | coding | upstream | 139094 | 86201044 ~ 86209191 (+) |
| LOC110514239 | LOC106594008 | coding | downstream | 19786 | 86368819 ~ 86395066 (+) |
| LOC118936865 | NA | coding | downstream | 46160 | 86395193 ~ 86396534 (+) |
| LOC118936866 | NA | coding | downstream | 56424 | 86405457 ~ 86409872 (+) |
| LOC118936868 | NA | coding | downstream | 226432 | 86575465 ~ 86671952 (+) |
| pgm2 | pgm2 | coding | downstream | 327557 | 86676590 ~ 86696929 (+) |
| G932070 | NA | non-coding | upstream | 2151 | 86345924 ~ 86346134 (+) |
| G932069 | NA | non-coding | upstream | 3443 | 86344543 ~ 86344842 (+) |
| G932067 | LOC106595295 | non-coding | upstream | 5346 | 86342719 ~ 86342939 (+) |
| G932065 | NA | non-coding | upstream | 8823 | 86339242 ~ 86339462 (+) |
| G932073 | NA | non-coding | downstream | 8518 | 86357551 ~ 86358364 (+) |
| G932075 | NA | non-coding | downstream | 17186 | 86366219 ~ 86366503 (+) |
| G932078 | NA | non-coding | downstream | 24807 | 86373840 ~ 86375635 (+) |
| G932174 | NA | non-coding | downstream | 53082 | 86402115 ~ 86403390 (+) |
| LOC110528614 | LOC106592313 | other | upstream | 335744 | 86008932 ~ 86017575 (+) |
| LOC110528615 | LOC106597603 | other | upstream | 395612 | 85951030 ~ 85957092 (+) |
| LOC118936495 | LOC106594836 | other | upstream | 445673 | 85900556 ~ 85920664 (+) |
| LOC118966668 | LOC106592313 | other | upstream | 453548 | 85893094 ~ 85950607 (+) |
| G932184 | NA | other | downstream | 94017 | 86441024 ~ 86475840 (+) |
| LOC110518842 | tbc1d1 | other | downstream | 374904 | 86704406 ~ 86830606 (+) |
| LOC110511479 | klhl5 | other | downstream | 648753 | 86997786 ~ 87054035 (+) |
| LOC110516832 | wdr19 | other | downstream | 770049 | 87057752 ~ 87129649 (+) |
| G932422 | NA | other | downstream | 846486 | 87195519 ~ 87288556 (+) |
