G932078


Basic Information

Item Value
gene id G932078
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 86373840 ~ 86375635 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1062210
gtgtgtgtgtgtgttgtgttaccaggctgctgtgtggatatataatgtgtgtgtgtgtgttgtgttaccaggctgaTGTGTGGAGTATGGGGTGCTGCTGTgtggatatataatgtgtgttgtgttaccaggctgaTGTGTGGAGTATGGGGTgctgctgtgtggatatataatgtgtgtgtgtgtgtgttgtgttaccaggctgctgtgtggatatataatgtgtgttgtgttaccaggctgatgtgtggatatataatgtgtgttgtgttaccaggctgctgtgtggatatataatgtgtgttgtgttaccaggctgatgtgtggatatataatgtgtgttgtgttaccaggctgatgtgtggatatataatgtgtgttgtgttaccaggctgctgtgtggatatataatgtgtgttgtgttaccaggctgctgtgtggatatataatgtgtgttgtgttaccaggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1062210 True 469 lncRNA 0.43 2 86373840 86375635

Neighbor

gene id symbol gene type direction distance location
LOC118936864 NA coding upstream 37310 86334061 ~ 86336728 (+)
LOC118936863 LOC104951401 coding upstream 50010 86287581 ~ 86323830 (+)
LOC110514691 uba6 coding upstream 88192 86230780 ~ 86285648 (+)
LOC118936862 NA coding upstream 115365 86257257 ~ 86258475 (+)
LOC110513338 LOC106595035 coding upstream 164649 86201044 ~ 86209191 (+)
LOC118936865 NA coding downstream 19558 86395193 ~ 86396534 (+)
LOC118936866 NA coding downstream 29822 86405457 ~ 86409872 (+)
LOC118936868 NA coding downstream 199830 86575465 ~ 86671952 (+)
pgm2 pgm2 coding downstream 300955 86676590 ~ 86696929 (+)
LOC110518842 tbc1d1 coding downstream 328771 86704406 ~ 86830606 (+)
G932075 NA non-coding upstream 7337 86366219 ~ 86366503 (+)
G932073 NA non-coding upstream 15476 86357551 ~ 86358364 (+)
G932071 NA non-coding upstream 24807 86348285 ~ 86349033 (+)
G932070 NA non-coding upstream 27706 86345924 ~ 86346134 (+)
G932069 NA non-coding upstream 28998 86344543 ~ 86344842 (+)
LOC110514239 LOC106594008 non-coding downstream 16309 86368819 ~ 86395066 (+)
G932174 NA non-coding downstream 26480 86402115 ~ 86403390 (+)
G932177 NA non-coding downstream 35835 86411470 ~ 86414693 (+)
G932179 NA non-coding downstream 42399 86418034 ~ 86418679 (+)
G932182 NA non-coding downstream 46661 86422296 ~ 86440685 (+)
LOC110528614 LOC106592313 other upstream 361299 86008932 ~ 86017575 (+)
LOC110528615 LOC106597603 other upstream 421167 85951030 ~ 85957092 (+)
LOC118936495 LOC106594836 other upstream 471228 85900556 ~ 85920664 (+)
LOC118966668 LOC106592313 other upstream 479103 85893094 ~ 85950607 (+)
G932184 NA other downstream 67415 86441024 ~ 86475840 (+)
LOC110511479 klhl5 other downstream 622151 86997786 ~ 87054035 (+)
LOC110516832 wdr19 other downstream 743447 87057752 ~ 87129649 (+)
G932422 NA other downstream 819884 87195519 ~ 87288556 (+)

Expression


Co-expression Network