G932174


Basic Information

Item Value
gene id G932174
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 86402115 ~ 86403390 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1062391
aaacatattacactagatgggactcactgtgtaaaacatattacactagatgggactcactgtgtaaaacatattacactagatgggactcactgtgtaaaacatattacactagatgggactcactgtgtagatatatattacactagatgggactcactgtgtagaaacatattaaactagatgggactcactgtgtaaaacatattaaactagatgggactcactgtgtaaaacatattaaactagatgggactcactgtgtaaaacatattacactagatgggactcactgtgt

Function

NR:

description
uncharacterized protein LOC110504261

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1062391 True 298 lncRNA 0.36 2 86402115 86403390

Neighbor

gene id symbol gene type direction distance location
LOC118936865 NA coding upstream 5581 86395193 ~ 86396534 (+)
LOC110514239 LOC106594008 coding upstream 7049 86368819 ~ 86395066 (+)
LOC118936864 NA coding upstream 65585 86334061 ~ 86336728 (+)
LOC118936863 LOC104951401 coding upstream 78285 86287581 ~ 86323830 (+)
LOC110514691 uba6 coding upstream 116467 86230780 ~ 86285648 (+)
LOC118936866 NA coding downstream 2067 86405457 ~ 86409872 (+)
LOC118936868 NA coding downstream 172075 86575465 ~ 86671952 (+)
pgm2 pgm2 coding downstream 273200 86676590 ~ 86696929 (+)
LOC110518842 tbc1d1 coding downstream 301016 86704406 ~ 86830606 (+)
LOC118936871 NA coding downstream 416850 86820240 ~ 86821014 (+)
G932078 NA non-coding upstream 26480 86373840 ~ 86375635 (+)
G932075 NA non-coding upstream 35612 86366219 ~ 86366503 (+)
G932073 NA non-coding upstream 43751 86357551 ~ 86358364 (+)
G932071 NA non-coding upstream 53082 86348285 ~ 86349033 (+)
G932177 NA non-coding downstream 8080 86411470 ~ 86414693 (+)
G932179 NA non-coding downstream 14644 86418034 ~ 86418679 (+)
G932182 NA non-coding downstream 18906 86422296 ~ 86440685 (+)
G932184 NA non-coding downstream 37634 86441024 ~ 86475840 (+)
G932194 NA non-coding downstream 55290 86458680 ~ 86459934 (+)
LOC110513338 LOC106595035 other upstream 197931 86201044 ~ 86209191 (+)
LOC110528614 LOC106592313 other upstream 389574 86008932 ~ 86017575 (+)
LOC110528615 LOC106597603 other upstream 449442 85951030 ~ 85957092 (+)
LOC118936495 LOC106594836 other upstream 499503 85900556 ~ 85920664 (+)
LOC118966668 LOC106592313 other upstream 507378 85893094 ~ 85950607 (+)
LOC110511479 klhl5 other downstream 594396 86997786 ~ 87054035 (+)
LOC110516832 wdr19 other downstream 715692 87057752 ~ 87129649 (+)
G932422 NA other downstream 792129 87195519 ~ 87288556 (+)

Expression


Co-expression Network