G932179


Basic Information

Item Value
gene id G932179
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 86418034 ~ 86418679 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1062404
tggagacaccaggactcattaaggatcaggttaaatggtgttgacaccaggactcattaaggatcaggttaaatggtgttgacaccaggactcattaaggatcaggttaaatggagacaccaggactcattaaggatcaggttaaatggtgttgacaccaggactcattaaggatcaggttaaatggtgttgacaccaggactcattaaggatcaggttaaatggtgttgacaccaggactcattaaggatcaggttaaatggtgttgacaccaggactcattaaggatcaggttaaatggagacaccaggactcattaaggatcaggttaaatggtgttgacaccaggactcattaaggatcaggttaaatggtgttgacaccaggactcattaaggatcaggttaaatggtgttgacaccaggactcattaaggatcaggttaaatggagacaccaggactcattaaggatcaggttaaatggagacaccaggactcattaaggatcaggttaaatggagacaccaggactcattaaggatcaggttaaatggtgttgacaccaggactcattaaggatcaggttaaatggtgttgacaccaggactcattaaggatcaggttaaatggtgttgacaccaggac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1062404 True 646 lncRNA 0.43 1 86418034 86418679

Neighbor

gene id symbol gene type direction distance location
LOC118936866 NA coding upstream 8162 86405457 ~ 86409872 (+)
LOC118936865 NA coding upstream 21500 86395193 ~ 86396534 (+)
LOC110514239 LOC106594008 coding upstream 22968 86368819 ~ 86395066 (+)
LOC118936864 NA coding upstream 81504 86334061 ~ 86336728 (+)
LOC118936863 LOC104951401 coding upstream 94204 86287581 ~ 86323830 (+)
LOC118936868 NA coding downstream 156786 86575465 ~ 86671952 (+)
pgm2 pgm2 coding downstream 257911 86676590 ~ 86696929 (+)
LOC110518842 tbc1d1 coding downstream 285727 86704406 ~ 86830606 (+)
LOC118936871 NA coding downstream 401561 86820240 ~ 86821014 (+)
LOC118936872 LOC106593007 coding downstream 463673 86882352 ~ 86916919 (+)
G932177 NA non-coding upstream 3341 86411470 ~ 86414693 (+)
G932174 NA non-coding upstream 14644 86402115 ~ 86403390 (+)
G932078 NA non-coding upstream 42399 86373840 ~ 86375635 (+)
G932075 NA non-coding upstream 51531 86366219 ~ 86366503 (+)
G932182 NA non-coding downstream 3617 86422296 ~ 86440685 (+)
G932184 NA non-coding downstream 22345 86441024 ~ 86475840 (+)
G932194 NA non-coding downstream 40001 86458680 ~ 86459934 (+)
G932201 NA non-coding downstream 60932 86479611 ~ 86481414 (+)
G932208 NA non-coding downstream 68630 86487309 ~ 86488196 (+)
LOC110513338 LOC106595035 other upstream 213850 86201044 ~ 86209191 (+)
LOC110528614 LOC106592313 other upstream 405493 86008932 ~ 86017575 (+)
LOC110528615 LOC106597603 other upstream 465361 85951030 ~ 85957092 (+)
LOC118936495 LOC106594836 other upstream 515422 85900556 ~ 85920664 (+)
LOC118966668 LOC106592313 other upstream 523297 85893094 ~ 85950607 (+)
LOC110511479 klhl5 other downstream 579107 86997786 ~ 87054035 (+)
LOC110516832 wdr19 other downstream 700403 87057752 ~ 87129649 (+)
G932422 NA other downstream 776840 87195519 ~ 87288556 (+)

Expression


Co-expression Network