Gene
RNA
| Item | Value |
|---|---|
| gene id | G932268 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 86665695 ~ 86666265 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1062543 | False | 288 | lncRNA | 0.56 | 2 | 86665695 | 86666265 |
| TU1062544 | True | 201 | lncRNA | 0.56 | 2 | 86665695 | 86665989 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936866 | NA | coding | upstream | 255823 | 86405457 ~ 86409872 (+) |
| LOC118936865 | NA | coding | upstream | 269161 | 86395193 ~ 86396534 (+) |
| LOC110514239 | LOC106594008 | coding | upstream | 270629 | 86368819 ~ 86395066 (+) |
| LOC118936864 | NA | coding | upstream | 329165 | 86334061 ~ 86336728 (+) |
| LOC118936863 | LOC104951401 | coding | upstream | 341865 | 86287581 ~ 86323830 (+) |
| pgm2 | pgm2 | coding | downstream | 10325 | 86676590 ~ 86696929 (+) |
| LOC110518842 | tbc1d1 | coding | downstream | 38141 | 86704406 ~ 86830606 (+) |
| LOC118936871 | NA | coding | downstream | 153975 | 86820240 ~ 86821014 (+) |
| LOC118936872 | LOC106593007 | coding | downstream | 216087 | 86882352 ~ 86916919 (+) |
| LOC110512499 | LOC106594418 | coding | downstream | 254307 | 86920572 ~ 86939031 (+) |
| G932258 | NA | non-coding | upstream | 71102 | 86594379 ~ 86594593 (+) |
| G932238 | NA | non-coding | upstream | 111119 | 86553624 ~ 86554576 (+) |
| G932223 | NA | non-coding | upstream | 134057 | 86530586 ~ 86531638 (+) |
| G932217 | NA | non-coding | upstream | 149032 | 86515439 ~ 86516663 (+) |
| G932210 | NA | non-coding | upstream | 173570 | 86490343 ~ 86492125 (+) |
| G932251 | NA | non-coding | downstream | 6387 | 86672652 ~ 86673383 (+) |
| G932270 | NA | non-coding | downstream | 9527 | 86675792 ~ 86676470 (+) |
| G932310 | NA | non-coding | downstream | 114692 | 86780957 ~ 86784288 (+) |
| G932311 | NA | non-coding | downstream | 131778 | 86798043 ~ 86799056 (+) |
| G932313 | NA | non-coding | downstream | 140720 | 86806985 ~ 86808585 (+) |
| G932184 | NA | other | upstream | 189855 | 86441024 ~ 86475840 (+) |
| LOC110513338 | LOC106595035 | other | upstream | 461511 | 86201044 ~ 86209191 (+) |
| LOC110528614 | LOC106592313 | other | upstream | 653154 | 86008932 ~ 86017575 (+) |
| LOC110528615 | LOC106597603 | other | upstream | 713022 | 85951030 ~ 85957092 (+) |
| LOC118936495 | LOC106594836 | other | upstream | 763083 | 85900556 ~ 85920664 (+) |
| LOC110511479 | klhl5 | other | downstream | 331521 | 86997786 ~ 87054035 (+) |
| LOC110516832 | wdr19 | other | downstream | 452817 | 87057752 ~ 87129649 (+) |
| G932422 | NA | other | downstream | 529254 | 87195519 ~ 87288556 (+) |
| G932466 | NA | other | downstream | 714403 | 87379860 ~ 87390230 (+) |
