G932285


Basic Information

Item Value
gene id G932285
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 86833043 ~ 86889386 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1062567
cGACCAGCCtgaagttaaataaagatttaaaataaataaacagattcACAACAAACCAAAATACTGTCACATCTGCTGTAATGACAAGGACAGTCCAGACAAAGCCCTGGACTCCAGCCCCCATGATGCCCTGCGCCACActgacgggagagagagggaggagagagagacccttccccctaatggttgagggttaggtcatactatctgaggagagagagagacccttccccctaatggttgaggggtaggtctatctgaggggagagagagagacccttccccctaatggttgaggggtaggtcatactatctgagaggagagagagagagacccttccccctaatggttgagggttaggtcatactatctgaggggagagagagagacccttccccctaatggttgagggttaggtcatactatctgaggggagagagagagagagagagagagagagagagagattgcagtAAGGGTGTACAGATTAGCTCCAGTGACCTGCACAGACAATATTTGCCATCCTCCTTCATGTGACACAGCCTTGGCACACGCACACATGACAAACATTAACCCATACCAGTTATTCCACTAGTGATGTGGCTAGGGCATCATTACCTCTAGTAATGTGGCTAGGGCATCATTACCTCTAGTGATGTGGCTAGGGCATCATTACCTCTAGTGATGTGTAGGGCATCATTACCTCTAGTGATGTGGCTAGGGCATCATTACCTCTAGTGATGTGTAGGGCATCATTACCTCTAGTGATGTGGCTAGGGCATCATTACCTCTAGTGATGTGTCATTACCTCTAGTGATGTGTAGGGCATCATTACCTCTAGTGATGTGGCTAGGGCATCATTACCTCTAGTGATGTGTAGGGCATTATTACCTCTAGTGATGTGTCCAGGGCATCATTACCTCTAGTGATGTGTCTGGGGCATCATTACCTCTAGTGATGTGGCTAGGGCATCATTACCTCTAGTGATGTGTAGGGCATCATTACCTCTAGTGATGTGTCCAGGGCATCATTACCTCTAGTGATGTGTCTAGGGCATCATTACCTCTAGAGATGTGTCTGGGGCATCATTACCTCTAGTGATGTGGCTAGGGCATCATTACCtctaggggttaaggtttgggttagggattaaggtatgggttaggggttaaggtatgggttaggggttaggg

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1062567 True 1194 lncRNA 0.48 3 86833043 86889386

Neighbor

gene id symbol gene type direction distance location
LOC110518842 tbc1d1 coding upstream 2437 86704406 ~ 86830606 (+)
LOC118936871 NA coding upstream 12029 86820240 ~ 86821014 (+)
pgm2 pgm2 coding upstream 136114 86676590 ~ 86696929 (+)
LOC118936868 NA coding upstream 161091 86575465 ~ 86671952 (+)
LOC118936866 NA coding upstream 423171 86405457 ~ 86409872 (+)
LOC110512499 LOC106594418 coding downstream 31186 86920572 ~ 86939031 (+)
LOC110511479 klhl5 coding downstream 117520 86997786 ~ 87054035 (+)
LOC110516832 wdr19 coding downstream 168366 87057752 ~ 87129649 (+)
LOC118936497 lias coding downstream 501686 87391072 ~ 87402637 (+)
LOC118936875 LOC105009164 coding downstream 565678 87454878 ~ 87471566 (+)
G932316 NA non-coding upstream 3520 86828749 ~ 86829523 (+)
G932315 NA non-coding upstream 5796 86826583 ~ 86827247 (+)
G932313 NA non-coding upstream 24458 86806985 ~ 86808585 (+)
G932311 NA non-coding upstream 33987 86798043 ~ 86799056 (+)
G932310 NA non-coding upstream 48755 86780957 ~ 86784288 (+)
G932342 NA non-coding downstream 17176 86906562 ~ 86907712 (+)
G932343 NA non-coding downstream 23158 86912544 ~ 86913458 (+)
G932346 NA non-coding downstream 51398 86940784 ~ 86941315 (+)
G932349 NA non-coding downstream 61046 86950432 ~ 86950646 (+)
G932350 NA non-coding downstream 65669 86955055 ~ 86955264 (+)
G932184 NA other upstream 357203 86441024 ~ 86475840 (+)
LOC110513338 LOC106595035 other upstream 628859 86201044 ~ 86209191 (+)
LOC110528614 LOC106592313 other upstream 820502 86008932 ~ 86017575 (+)
LOC110528615 LOC106597603 other upstream 880370 85951030 ~ 85957092 (+)
G932422 NA other downstream 306133 87195519 ~ 87288556 (+)
G932466 NA other downstream 491282 87379860 ~ 87390230 (+)
G932484 NA other downstream 515401 87404787 ~ 87406846 (+)

Expression


Co-expression Network