G932317


Basic Information

Item Value
gene id G932317
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 86837817 ~ 86838443 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1062608
ATTGAGTGGGTGATTGGTTGAGTGGGTAGGTGATTGAGTGGGTGGTTGAGTGGGTAGGTGATTGAGTGGGTGATTGGTTGAGTGGGTGGGTGATTGAGTGGGTGGTTCCTGCCGATCTTCTAAGGTTCTTTGTTGAATacccttttttttctccccaatattTTCTCCCACAAATCTGACACAACCTTAAAATATCTACGTTTACATTTCTACATCAACAAATAACCCTCATTTACATGTTCATCTCTCTTATCAAAATGAAAATAAACCATGAAATACATTTACTCAATACAaatgttattttaattttaaatgcATCTTTCTCGTGTCC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1062608 True 331 lncRNA 0.37 2 86837817 86838443

Neighbor

gene id symbol gene type direction distance location
LOC110518842 tbc1d1 coding upstream 7211 86704406 ~ 86830606 (+)
LOC118936871 NA coding upstream 16803 86820240 ~ 86821014 (+)
pgm2 pgm2 coding upstream 140888 86676590 ~ 86696929 (+)
LOC118936868 NA coding upstream 165865 86575465 ~ 86671952 (+)
LOC118936866 NA coding upstream 427945 86405457 ~ 86409872 (+)
LOC118936872 LOC106593007 coding downstream 43909 86882352 ~ 86916919 (+)
LOC110512499 LOC106594418 coding downstream 82129 86920572 ~ 86939031 (+)
LOC110511479 klhl5 coding downstream 168463 86997786 ~ 87054035 (+)
LOC110516832 wdr19 coding downstream 219309 87057752 ~ 87129649 (+)
LOC118936497 lias coding downstream 552629 87391072 ~ 87402637 (+)
G932279 NA non-coding upstream 917 86836631 ~ 86836900 (+)
G932316 NA non-coding upstream 8294 86828749 ~ 86829523 (+)
G932315 NA non-coding upstream 10570 86826583 ~ 86827247 (+)
G932313 NA non-coding upstream 29232 86806985 ~ 86808585 (+)
G932311 NA non-coding upstream 38761 86798043 ~ 86799056 (+)
G932327 NA non-coding downstream 19947 86858390 ~ 86860594 (+)
G932328 NA non-coding downstream 25455 86863898 ~ 86864494 (+)
G932342 NA non-coding downstream 68119 86906562 ~ 86907712 (+)
G932343 NA non-coding downstream 74101 86912544 ~ 86913458 (+)
G932346 NA non-coding downstream 102341 86940784 ~ 86941315 (+)
G932184 NA other upstream 361977 86441024 ~ 86475840 (+)
LOC110513338 LOC106595035 other upstream 633633 86201044 ~ 86209191 (+)
LOC110528614 LOC106592313 other upstream 825276 86008932 ~ 86017575 (+)
LOC110528615 LOC106597603 other upstream 885144 85951030 ~ 85957092 (+)
G932422 NA other downstream 357076 87195519 ~ 87288556 (+)
G932466 NA other downstream 542225 87379860 ~ 87390230 (+)
G932484 NA other downstream 566344 87404787 ~ 87406846 (+)

Expression


Co-expression Network