G932388


Basic Information

Item Value
gene id G932388
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 87121032 ~ 87125475 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1062706
gtattgatgtattggttggtgtattggttggtgtattggttggttgatgtattggttggttgatgtattggttggttggtgtattggttggttgatgtattggttgatgtattggttggttgatgtattggttgatgtattggttgatgtattggttgatgtattggttgatgtattggttggttgatgtattgatgtattggttggtgtattgatgtattggttggttgatgtattggttggttggtgtattggttggttgatgtattggttgg
>TU1062708
atgtattggttggttgatgtattggttggtgtattggttggttgatgtattggttgatgtattggttgatgtattggttgatgtattggttgatgtattggttggttgatgtattgatgtattggttggtgtattgatgtattggttggttgatgtattggttggttgatgtattggttggttgatgtattggttggttgatgtattggtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1062706 False 275 lncRNA 0.37 3 87121032 87125475
TU1062708 True 212 lncRNA 0.36 3 87122242 87125014

Neighbor

gene id symbol gene type direction distance location
LOC110511479 klhl5 coding upstream 67660 86997786 ~ 87054035 (+)
LOC110512499 LOC106594418 coding upstream 182001 86920572 ~ 86939031 (+)
LOC118936872 LOC106593007 coding upstream 204113 86882352 ~ 86916919 (+)
LOC110518842 tbc1d1 coding upstream 290426 86704406 ~ 86830606 (+)
LOC118936497 lias coding downstream 265597 87391072 ~ 87402637 (+)
LOC118936875 LOC105009164 coding downstream 329589 87454878 ~ 87471566 (+)
LOC110519305 NA coding downstream 448192 87573667 ~ 87623897 (+)
LOC118936877 rhoh coding downstream 504456 87629931 ~ 87655775 (+)
nachra9 nachra9 coding downstream 549602 87675077 ~ 87696588 (+)
G932384 NA non-coding upstream 10864 87106248 ~ 87110168 (+)
G932283 NA non-coding upstream 117203 87003276 ~ 87003829 (+)
G932351 NA non-coding upstream 162902 86956440 ~ 86958130 (+)
G932350 NA non-coding upstream 165768 86955055 ~ 86955264 (+)
G932401 NA non-coding downstream 16426 87141901 ~ 87155342 (+)
G932397 LOC106591067 non-coding downstream 38710 87164185 ~ 87167671 (+)
G932421 NA non-coding downstream 64147 87189622 ~ 87193354 (+)
G932422 NA non-coding downstream 70044 87195519 ~ 87288556 (+)
G932428 NA non-coding downstream 83043 87208518 ~ 87210577 (+)
G932184 NA other upstream 645192 86441024 ~ 86475840 (+)
LOC110513338 LOC106595035 other upstream 916848 86201044 ~ 86209191 (+)
LOC110528614 LOC106592313 other upstream 1108491 86008932 ~ 86017575 (+)
G932466 NA other downstream 255193 87379860 ~ 87390230 (+)
G932484 NA other downstream 279312 87404787 ~ 87406846 (+)
G932526 pds5a other downstream 388470 87513945 ~ 87531331 (+)

Expression


Co-expression Network