G932446


Basic Information

Item Value
gene id G932446
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 87259979 ~ 87260783 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1062819
accctaacggttttctcactctcacccaaaatcaaatgacgttgtgacccaattaaaggcacttctggttggcacaggaagctataagtaaactcatatcctgattggggtatgcctttacataatcctgagttttaagtctttacgttaagaactgagttatttacggagggtttagtatgtgtgtgttatttcagaaaatcatagaaaatcacagaaatctcgcagagctccgcagcacactttaaaaagattcgtatgaacaccctgcaactggatctgtaaccgttgaaaaaaaaaaaacgcctatttgtgaccatcaccaatttgtcattgttccgtttctcttaaatgacgatagataaatggctggttctttttttattgacaccggaggctccttgactttgacctgaagtggaaaaataatttctctatttccattttggacctttaatcccagaaaaatggccataactcaaaaaccgttgaggcctag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1062819 True 499 lncRNA 0.38 2 87259979 87260783

Neighbor

gene id symbol gene type direction distance location
LOC110516832 wdr19 coding upstream 130330 87057752 ~ 87129649 (+)
LOC110511479 klhl5 coding upstream 206607 86997786 ~ 87054035 (+)
LOC110512499 LOC106594418 coding upstream 320948 86920572 ~ 86939031 (+)
LOC118936872 LOC106593007 coding upstream 343060 86882352 ~ 86916919 (+)
LOC118936871 NA coding upstream 438965 86820240 ~ 86821014 (+)
LOC118936497 lias coding downstream 130289 87391072 ~ 87402637 (+)
LOC118936875 LOC105009164 coding downstream 194281 87454878 ~ 87471566 (+)
LOC110519305 NA coding downstream 312884 87573667 ~ 87623897 (+)
LOC118936877 rhoh coding downstream 369148 87629931 ~ 87655775 (+)
nachra9 nachra9 coding downstream 414294 87675077 ~ 87696588 (+)
G932438 NA non-coding upstream 2112 87254493 ~ 87257867 (+)
G932430 NA non-coding upstream 43142 87216315 ~ 87216837 (+)
G932429 NA non-coding upstream 46299 87212017 ~ 87213680 (+)
G932428 NA non-coding upstream 49402 87208518 ~ 87210577 (+)
G932421 NA non-coding upstream 66625 87189622 ~ 87193354 (+)
G932462 rfc1 non-coding downstream 107319 87368102 ~ 87368636 (+)
G932466 NA non-coding downstream 119077 87379860 ~ 87390230 (+)
G932483 NA non-coding downstream 139862 87400645 ~ 87400929 (+)
G932484 NA non-coding downstream 144004 87404787 ~ 87406846 (+)
G932467 NA non-coding downstream 178580 87439363 ~ 87440003 (+)
LOC110518842 tbc1d1 other upstream 508315 86704406 ~ 86830606 (+)
G932184 NA other upstream 784139 86441024 ~ 86475840 (+)
LOC110513338 LOC106595035 other upstream 1055795 86201044 ~ 86209191 (+)
G932526 pds5a other downstream 253162 87513945 ~ 87531331 (+)

Expression


Co-expression Network