G932507



Basic Information


Item Value
gene id G932507
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 87463134 ~ 87464648 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1062935
GTAAATGGGTTTCTCCTCCCTGACGTCGTTCTGTAAATGGGTTTCTCCTCCTCCACGTCGTTCTGTAAATGGGTTTCTCCTCCACGTCGTTCTGTAAATGGGTTTCTCCTCCACGTCGTTCTGTAAATGGGTTTCTCCTCCTCCACGTCGTTCTGTAAATGGGTTTCTCCTCCTCCATGTCGTTCTGTAAATGGGTTTCTCCTCCCTGACGGCGTTCTGTAAACGGGTTCCTCCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1062935 True 235 lncRNA 0.50 2 87463134 87464648

Neighbor


gene id symbol gene type direction distance location
LOC118936497 lias coding upstream 60497 87391072 ~ 87402637 (+)
LOC110516832 wdr19 coding upstream 333485 87057752 ~ 87129649 (+)
LOC110511479 klhl5 coding upstream 409762 86997786 ~ 87054035 (+)
LOC110512499 LOC106594418 coding upstream 524103 86920572 ~ 86939031 (+)
LOC118936872 LOC106593007 coding upstream 546215 86882352 ~ 86916919 (+)
LOC110519305 NA coding downstream 109019 87573667 ~ 87623897 (+)
LOC118936877 rhoh coding downstream 165283 87629931 ~ 87655775 (+)
nachra9 nachra9 coding downstream 210429 87675077 ~ 87696588 (+)
LOC118966670 NA coding downstream 241343 87705991 ~ 87756519 (+)
LOC118936878 LOC100196562 coding downstream 300205 87764853 ~ 87777685 (+)
G932467 NA non-coding upstream 23131 87439363 ~ 87440003 (+)
G932484 NA non-coding upstream 56288 87404787 ~ 87406846 (+)
G932483 NA non-coding upstream 62205 87400645 ~ 87400929 (+)
G932466 NA non-coding upstream 73303 87379860 ~ 87390230 (+)
G932462 rfc1 non-coding upstream 94498 87368102 ~ 87368636 (+)
G932525 NA non-coding downstream 46725 87511373 ~ 87512161 (+)
G932529 NA non-coding downstream 52326 87516974 ~ 87518618 (+)
G932530 NA non-coding downstream 57823 87522471 ~ 87523595 (+)
G932526 pds5a non-coding downstream 63525 87513945 ~ 87531331 (+)
G932532 NA non-coding downstream 70911 87535559 ~ 87536020 (+)
G932422 NA other upstream 174578 87195519 ~ 87288556 (+)

Expression



Co-expression Network