G932551


Basic Information

Item Value
gene id G932551
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 87590299 ~ 87591017 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1062992
ttattgtgtgTTGTTGTATTGGCTGAGGCTCTATCTGTGTAAAGGAAGTAAACCTTGTCTGAGCCAGAACAGCCTATTGGCTCCTGCCCTATTTCCTCTTGCCCTATTGGCTCCTGCCCTATTTCCTCTTGCCCTATTGGCTCCTGCCCTATTTCCTCTTGCCCTATTGGCTCTTGCCCtatttcctgtttctgtagtgggacagcttgatgtacagtacaacccctggacaggacactagtctatctcctgtttctgatgtac

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1062992 True 264 lncRNA 0.48 3 87590299 87591017

Neighbor

gene id symbol gene type direction distance location
LOC118936875 LOC105009164 coding upstream 118733 87454878 ~ 87471566 (+)
LOC118936497 lias coding upstream 187662 87391072 ~ 87402637 (+)
LOC110516832 wdr19 coding upstream 460650 87057752 ~ 87129649 (+)
LOC110511479 klhl5 coding upstream 536927 86997786 ~ 87054035 (+)
LOC110512499 LOC106594418 coding upstream 651268 86920572 ~ 86939031 (+)
LOC118936877 rhoh coding downstream 38914 87629931 ~ 87655775 (+)
nachra9 nachra9 coding downstream 84060 87675077 ~ 87696588 (+)
LOC118966670 NA coding downstream 114974 87705991 ~ 87756519 (+)
LOC118936878 LOC100196562 coding downstream 173836 87764853 ~ 87777685 (+)
LOC118936879 NA coding downstream 199247 87789848 ~ 87792717 (+)
G932546 NA non-coding upstream 25858 87563884 ~ 87564441 (+)
G932532 NA non-coding upstream 54279 87535559 ~ 87536020 (+)
G932526 pds5a non-coding upstream 58968 87513945 ~ 87531331 (+)
G932530 NA non-coding upstream 66704 87522471 ~ 87523595 (+)
G932529 NA non-coding upstream 71681 87516974 ~ 87518618 (+)
LOC110519305 NA non-coding downstream 31312 87573667 ~ 87623897 (+)
G932541 NA non-coding downstream 33135 87624152 ~ 87625724 (+)
G932557 NA non-coding downstream 40253 87631270 ~ 87631904 (+)
G932560 NA non-coding downstream 51097 87642114 ~ 87648378 (+)
G932563 NA non-coding downstream 75134 87666151 ~ 87666916 (+)
G932484 NA other upstream 183453 87404787 ~ 87406846 (+)
G932466 NA other upstream 200069 87379860 ~ 87390230 (+)
G932422 NA other upstream 301743 87195519 ~ 87288556 (+)

Expression


Co-expression Network