G932541


Basic Information

Item Value
gene id G932541
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 87624152 ~ 87625724 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1062980
tctctctctctctctctctctgtctgtctgtctgtctctccctgtctctaacaATTATTTTAATAGCTGCCGAAGAAATTGTCTTAATCTattttaatgtcttcactgttGCCATGTTTGTACAATATTTGTGTTTTTGTATGAAACTTTATCAGGATTTACAAACAATGACAGAGCGAGAGTTCATTTTAAATGatattaaatgtagatttttagATTTTATAAAACCATGTCAATCTAAGTGTATATCATTTATCTTAACATGATGTTTCTGTAATGGTGAATGTGTGGGGTTATTTACATTTTAAGAGAAGATATCTTGCCCGTTTATACATTTGATCAGAAGTGATATCTGGCCCGTTTATACATTAGATCAGAAGTGATATCTGGCCCGTTTATACATTAGATCAGAAGTGATATCTGGCCCGTTTATACATTAGATCAGAAGTGATATCTGGGCCGTTTATACATTAGATCAGAAGTGATATCTGGGCCG
>TU1062979
AGAAATTGTCTTAATCTattttaatgtcttcactgttGCCATGTTTGTACAATATTTGTGTTTTTGTATGAAACTTTATCAGGATTTACAAACAATGACAGAGCGAGAGTTCATTTTAAATGatattaaatgtagatttttagATTTTATAAAACCATGTCAATCTAAGTGTATATCATTTATCTTAACATGATGTTTCTGTAATGGTGAATGTGTGGGGTTATTTACATTTTAAGAGAAGATATCTTGCCCGTTTATACATTTGATCAGAAGTGATATCTGGCCCGTTTATACATTAGATCAGAAGTGATATCTGGCCCGTTTATACATTAGATCAGAAGTGATATCTGGCCCGTTTATACATTAGATCAGAAGTGATATCTGGGCCGTTTATACATTAGATCAGAAGTGATATCTGGGCCGTTTATACATTAGATCAGAAGTGATATCTGGCCTGTTTATACATTTGATCAGAAGTGATATCTGGGCCGTTTATACATTAGATCAGAAGTGATATCTGGGCCGTTTATACATTAGATCAGAAGTGATATCTGGCCCGTTTATACATTTGATCAGAAGTGATATCTGGCCCGTTTATACATTAGATCAGAAGTGATAACCGGGCCGTTTATACATTAGATCAAAAGTGATATCTGGGCCGTTTATACATTTGATCAGAAGTGATATCTGGCCCGTTTATACATTAGATCAGAAGTGATATCTGGGCCGTTTATACATTAGATCAGAAGTGATATCTGGGCCGTTTATACATTAGATCAGAAGTGATATCTGGCCTGTTTATACATTTGATCAGAAGTGATATCTGGGCCGTTTATACATTAGATCAGAAGTGATATCTGGGCCGTTTATACATTAGATCAGAAGTGATATCTGGCCTGTTTATACATTTGATCAGAAGTGATATCTGGCCCGTTTATACATTAGATCAGAAGTGATATCTGGCCTGTTTATACATTAGATCAGAAGTGATATCTTGCCCGTTTATACATTAGATCAGAAGTGATAACTGGGCCGTTTATACATTAGATCAGAAGTGATATCTGGGCCGTTTATACATTAGATCAGAAGTGATAACCGGGCCGTTTATACATTAGATCAGAAGTGATATCTGGGCCGTTTATACATTAGATCAGAAGTGATATCTGGGCCGTTTATACATTAGATCAGAAGTGATATCTGGGCCGTTTATACATTAGATCAGAAGTGATATCTGGGCCGTTTATACATTAGATCGAAGAGTATTGACAGTGTTGACAGAAACAGTGTTTGGTTTTGTTCTACTTTATggctgtcccaaatggccccctattctctatatagggaatccaaatggccccctattctctatatagggaatccaaatggccccctattctctatagagaGAATCCAAATGGccctctattctctatatagggaATCCAAATGGccctctattctctatatagggaatccaaatggccccctattctctataga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1062980 False 496 lncRNA 0.34 1 87624152 87624647
TU1062979 True 1500 lncRNA 0.37 1 87624225 87625724

Neighbor

gene id symbol gene type direction distance location
LOC110519305 NA coding upstream 307 87573667 ~ 87623897 (+)
LOC118936875 LOC105009164 coding upstream 152586 87454878 ~ 87471566 (+)
LOC118936497 lias coding upstream 221515 87391072 ~ 87402637 (+)
LOC110516832 wdr19 coding upstream 494503 87057752 ~ 87129649 (+)
LOC110511479 klhl5 coding upstream 570780 86997786 ~ 87054035 (+)
LOC118936877 rhoh coding downstream 4207 87629931 ~ 87655775 (+)
nachra9 nachra9 coding downstream 49353 87675077 ~ 87696588 (+)
LOC118966670 NA coding downstream 80267 87705991 ~ 87756519 (+)
LOC118936878 LOC100196562 coding downstream 139129 87764853 ~ 87777685 (+)
LOC118936879 NA coding downstream 164540 87789848 ~ 87792717 (+)
G932551 NA non-coding upstream 33135 87590299 ~ 87591017 (+)
G932546 NA non-coding upstream 59711 87563884 ~ 87564441 (+)
G932532 NA non-coding upstream 88132 87535559 ~ 87536020 (+)
G932526 pds5a non-coding upstream 92821 87513945 ~ 87531331 (+)
G932557 NA non-coding downstream 5546 87631270 ~ 87631904 (+)
G932560 NA non-coding downstream 16390 87642114 ~ 87648378 (+)
G932563 NA non-coding downstream 40427 87666151 ~ 87666916 (+)
G932998 NA non-coding downstream 71270 87696994 ~ 87697338 (+)
G932484 NA other upstream 217306 87404787 ~ 87406846 (+)
G932466 NA other upstream 233922 87379860 ~ 87390230 (+)

Expression


Co-expression Network