LOC110535151 (LOC106579763)


Basic Information

Item Value
gene id LOC110535151
gene name LOC106579763
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 632123 ~ 646961 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021620012.2
TGTGTAATGTTTTGAGAGGGGAGAGACGCTGTAGCTTCCTTCTTCCATCGGTTCCAGCCATTCTTTTACTCGCGCCCATCTAACGTCAGTGGAGAACTTCTCGTGTCTCGCACACAGACACCTTGTCTGTTAAAGACGCGCAGCATCCACTCCACGGGAAGATGGAGAAACGGCAAGCACCGTTCTCCAGATTTACAGAACAAGAAAAATCAAGGAATTCTGTCAGTTAGGATGCAAATAGTGCTTTTCCGTCGATAGGAACTTCTTTTAGGGAAAGGTGTGCTCTGATCTGCTGAAGGAACATGGATGTGTctgggggccagcagcagtatgGAGGATCTAAGAAGAGGGTGAAGATCCACCCCAATTCCGTCACAGTGAAATACGCCACCCACTTCCCCCAGCCTGGAGACGAGGGTTACGACGATGCTCCGTCCTTTGAGGACTTTGATTCGTTTGCGAAGGCCAGCCCTGCTAAGAGACTGGTGACAGACAGTAGTAGGAAGACCATGGAGACCCCCAGGACGTTATGGGGAGGGGTGGAGCCCCAGAGCCGGGACAAGGGGGTCGGGGGGCAGCTGGCTAGCTTCGGGGAGGCCAACGTCCTGGCGTCCCGGGTCACCTGGATGGCGTTGTTCGGGGCAGCGGTTGCTCACGGCTGCGTTGCTCTGATCACACGGCTGGCGGCAGACCGCTCCAAAGTGCCGTCCCTGGAGCTGATCTTCATCCGGTCTGTGATCCAGGTCCTGTCCATCACAGTGGTGTTTTATAACCAGGAGGAACCCTTCGGCCCGAAGGGGTACCGCCTCCGGCTCTTCTTCTATGGTGTCTGCAACGTCATCTCCATCACCTGCGCCTACACCGCCTTCGCCATCGTGCCGCCCAGCAACGGTACCATCATGTGGCGCGCAACCACCACGGTGTTCAGCGGCGTGATGGCCTTCCTGTTGTTAGACGAGAGGCTGGGCTACACGGACGTGGTGACGGTGGTGGGCAGCGTGTTCGGCCTGTGTCTCGTCATGATCCCCAATGTGGCCGACGAGGAGAAGTCTCGCCTCACCTTCTGGAAGGAGGCGTTCGGCTACACCATGACGGTGATGGCCGGCCTCACCGGAGCCCTGTCCATGATCGTCTACCGGGCCATCAAGGAGCGTGTCAGCATGTGGACAGCCCTGTTCACGTTCGGCTGGACGGGCACGGTGTGGGGCGCCTCCACCATGTTCGTTATGCAGGAGCCGATCATCCCCCTGGATGGGGAGACGTGGGGCTACCTCACGGGGATCTGTATCTGTTCCACCGTGGCGTTCCTGGGGGTCTACTACGCCCTCAACAAGTTCCACCCCGCCCTGGTGAGCACCGTGCAGCACCTGGAGATAGTGGTGGCCATGTTGCTTCAGCTCATGGTGCTGCGCATGGTCCCCTCCATCTACGACGTCATCGGGGGGCTGGTCATCATGGCCAGTGTGTTTACTCTAACGGGAGTGAAGCTATACAGGGTCAGCCGGGCTGTACGGCAGGACTACCAGGAGATACTGAACTCACCCATCAAATAGAGTCTGGAGTTCTGATTCAGGATCAGTTTGGCCCTATAGACCATAATgcataagattacatggacaggggtgAAACGGATTGTAGACCTCCACttctactctctctatatatttagAATTGTGGTGGTCATTAACTTGACGGAGTGTCAACTTGTGTGCAATGTCTTTGCTAAAGTTCTATTTGTCTGTGAAAAGATATTCCACGATGAAAGGGTTTGTTCTGATAGCTTTGATTTCATGTCAACTGTGATGAAGAAGAGTGTCAAAGTAACATGTGTTGTTTAGATTGTATGATACGTTCTGTACCTTAACTTTACAGCTATGGCGTAAATATGTGTCAGAGATATTCAGgctgtgtctgtctctgctaGATGACCAGCATCTAAATAAGATACTAGGTACTACTGCTGCTGACAGTGTGTTAACAGGGCCGTGTTGACAAGATGATAAatcatttttgtttgtttcctgCA

Function

NR:

description
solute carrier family 35 member G2-like

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021620012.2 True 2026 mRNA 0.54 2 632123 646961

Neighbor

gene id symbol gene type direction distance location
LOC110536523 LOC106563098 coding upstream 27784 575640 ~ 604339 (+)
LOC118937458 LOC106594516 coding upstream 67547 561434 ~ 564576 (+)
LOC110535152 LOC106590691 coding upstream 89770 485692 ~ 542353 (+)
slc22a13b NA coding upstream 193593 392112 ~ 438530 (+)
cry-dash LOC106579757 coding upstream 253760 340641 ~ 378363 (+)
LOC110535150 LOC106590688 coding downstream 95531 742492 ~ 859531 (+)
fam162a e2ig5 coding downstream 706028 1352989 ~ 1364272 (+)
nktr nktr coding downstream 742412 1389373 ~ 1479628 (+)
LOC110535167 LOC106579754 coding downstream 1196203 1839051 ~ 1855581 (+)
si:ch73-206p6.1 LOC106579752 coding downstream 1729740 2376701 ~ 2387592 (+)
G933650 NA non-coding upstream 6725 625165 ~ 625398 (+)
G933647 NA non-coding upstream 10452 621386 ~ 621671 (+)
G933639 NA non-coding upstream 15475 616422 ~ 616648 (+)
G933636 NA non-coding upstream 18104 613757 ~ 614019 (+)
G933635 NA non-coding upstream 18533 613264 ~ 613590 (+)
G933676 NA non-coding downstream 891 647852 ~ 648073 (+)
G933677 NA non-coding downstream 4627 651588 ~ 652256 (+)
G933684 NA non-coding downstream 91256 738217 ~ 738520 (+)
G933686 NA non-coding downstream 91753 738714 ~ 739320 (+)
G933718 NA non-coding downstream 129415 776376 ~ 776878 (+)
G933532 LOC106594516 other upstream 69464 539980 ~ 562659 (+)
G933679 NA other downstream 78226 725187 ~ 728205 (+)
G933799 NA other downstream 302570 949531 ~ 951584 (+)
G934169 NA other downstream 660566 1307527 ~ 1307759 (+)
G934256 NA other downstream 841115 1488076 ~ 1496014 (+)
G934579 NA other downstream 1179666 1826627 ~ 1827366 (+)

Expression


Co-expression Network