LOC118937290


Basic Information

Item Value
gene id LOC118937290
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 3247826 ~ 3249391 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034533.1
TAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGATTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGATTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGATTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGTCGATAGGGGACAACACTGTTTAGGCAGGTTTATAGGGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGTCGATAGGGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGATAATAGAGGACAACACTGTTTAGGCAGGTTTAT
>TU1067001
GGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGTCGATAGGGGACAACACTGTTTAGGCAGGTTTATAGAGTCGATAGGGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAGAGGACAACACTGTTTAGGCAGGTTTATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034533.1 False 1423 mRNA 0.41 3 3247826 3249391
TU1067001 True 259 lncRNA 0.42 2 3248430 3249335

Neighbor

gene id symbol gene type direction distance location
plod2 LOC106579751 coding upstream 716852 2419339 ~ 2530974 (+)
si:ch73-206p6.1 LOC106579752 coding upstream 860234 2376701 ~ 2387592 (+)
LOC110535167 LOC106579754 coding upstream 1392257 1839051 ~ 1855581 (+)
nktr nktr coding upstream 1768198 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 1883554 1352989 ~ 1364272 (+)
LOC118937434 NA coding downstream 152661 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 274166 3523557 ~ 3616312 (+)
LOC110535177 tceb1 coding downstream 384549 3633940 ~ 3636886 (+)
flj11011l ube2w coding downstream 403404 3652795 ~ 3676466 (+)
stau2 stau2 coding downstream 434483 3683874 ~ 3961133 (+)
G935683 LOC106579747 non-coding upstream 5458 3234690 ~ 3242368 (+)
G935680 NA non-coding upstream 66761 3180398 ~ 3181065 (+)
G935673 NA non-coding upstream 72479 3175138 ~ 3175347 (+)
G935658 NA non-coding upstream 89503 3158082 ~ 3158323 (+)
G935654 NA non-coding upstream 90996 3156592 ~ 3156830 (+)
G935719 NA non-coding downstream 34616 3284007 ~ 3284298 (+)
G935722 NA non-coding downstream 38159 3287550 ~ 3288845 (+)
G935723 NA non-coding downstream 41012 3290403 ~ 3290882 (+)
G935726 NA non-coding downstream 43904 3293295 ~ 3299432 (+)
G935737 NA non-coding downstream 66291 3315682 ~ 3316741 (+)
G934640 NA other upstream 1338746 1908660 ~ 1909080 (+)
G934579 NA other upstream 1420460 1826627 ~ 1827366 (+)
G934256 NA other upstream 1751812 1488076 ~ 1496014 (+)
G934169 NA other upstream 1940067 1307527 ~ 1307759 (+)
G933799 NA other upstream 2296242 949531 ~ 951584 (+)
G935846 NA other downstream 300648 3550039 ~ 3550487 (+)
G935976 NA other downstream 731380 3980771 ~ 3981151 (+)
G935977 NA other downstream 732460 3981851 ~ 3982198 (+)
G937051 NA other downstream 1770514 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 1893926 5143317 ~ 5144565 (+)

Expression


Co-expression Network