LOC110536526 (kcnb2)



Basic Information


Item Value
gene id LOC110536526
gene name kcnb2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 4361734 ~ 4376996 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021622292.2
TGGAGGTATATATCGAATACTCACACCGGGAGTCTCTATCACCCTCTACAAAACTGCCTTCCTTCATTTCTGCTGAGGATTTTTCATCAAGAGGGTAGccgaaatgtttttttttctcgttTGAGTTTATCAAAATGTTGGAGAAATGTCTATTGACTCAGAGTCGCGTTCAAAGCGCAGAGCTCGGAATCTTTGCGGATTGACTGAAGGGGATCCCGGATCAATTATTTATCTCCTTTCCACATCGGAGCAAGAGTTTGCATGCAAAAGGTGGTTTATTTCGGCAAGATaagcctcctcctcctgtcctccatccctcctcctccaccaacacACCACCATGGCTGAGACAGTTGGACCTAAGACCCCCCTAAACACTCCACGGGGTAACAACCACCCAGGGGTAACCTCCCTCCCCCCAGAGCCCATCCAAATCATCCGCACCAAGGCCCGCTCCAGGAGGGTCCGCGTCAACGTCGGAGGTCTAAACCACGAGGTCCTGTGGCGGACGCTGGACCGGCTGCCCCGTACCCGCCTGGGTAAGCTCCGAGACTGCAACACCCACGAGAGCCTGATGGAGGTCTGCGACGACTACAGCCTCCATGAGAACGAATACTTCTTTGACCGGCACCCGGGCGCCTTCACCTCGATCCTCAACTTCTACCGCACAGGGAAGCTGCACATGATGGAGGAGATGTGCGCCCTGTCGTTCGGCCAGGAGCTCGACTACTGGGGTATAGATGAGATCTACCTGGAGTCCTGCTGCCAGGCCCGGTACCACCAGAAGAAAGAACAGATGAACGAGGAGCTGCGGAGGGAGGCGGAGacgctgaaagagagagagggagagattgagtttgataacacctgctgccaggagaagaggaagaagctTTGGGACCTCCTGGAGAAACCCAGCTCTTCCCTGCCTGCCAaggtaagagagggagggatttga

Function


symbol description
kcnb2 Predicted to enable delayed rectifier potassium channel activity; protein heterodimerization activity; and transmembrane transporter binding activity. Predicted to be involved in potassium ion transmembrane transport and protein localization to plasma membrane. Predicted to be located in neuronal cell body membrane. Predicted to be part of voltage-gated potassium channel complex. Predicted to be active in dendrite and neuronal cell body. Predicted to be integral component of membrane.

NR:

description
potassium voltage-gated channel subfamily B member 2-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021622292.2 True 958 mRNA 0.54 2 4361734 4376996
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110535180 LOC106909841 coding downstream 274430 4078811 ~ 4087304 (-)
terf1 terf1 coding downstream 315232 4034747 ~ 4046502 (-)
LOC110536524 rdh10 coding downstream 346039 3994738 ~ 4015695 (-)
gdap1 gdap1 coding downstream 839531 3503419 ~ 3522203 (-)
LOC110535172 LOC106590674 coding downstream 966436 3385591 ~ 3395298 (-)
LOC110498599 xkr9 coding upstream 767235 5144231 ~ 5161121 (-)
LOC118937461 NA coding upstream 1134795 5511791 ~ 5514088 (-)
LOC110536534 sulf1 coding upstream 1169412 5546408 ~ 5626954 (-)
LOC110536541 LOC106590236 coding upstream 1368498 5745494 ~ 5912106 (-)
LOC110535190 lsm5 coding upstream 1661598 6038594 ~ 6041773 (-)
G936596 NA non-coding downstream 309 4358251 ~ 4361425 (-)
G936586 NA non-coding downstream 20732 4340799 ~ 4341002 (-)
G936585 NA non-coding downstream 21114 4340263 ~ 4340620 (-)
G936584 NA non-coding downstream 22150 4339366 ~ 4339584 (-)
G936573 NA non-coding downstream 35109 4326402 ~ 4326625 (-)
G936608 NA non-coding upstream 15791 4392787 ~ 4395056 (-)
G936612 NA non-coding upstream 24767 4401763 ~ 4402051 (-)
G936738 NA non-coding upstream 126283 4503279 ~ 4504054 (-)
G936758 NA non-coding upstream 186478 4563474 ~ 4563819 (-)
G936761 NA non-coding upstream 190753 4567749 ~ 4633889 (-)
G936486 NA other downstream 292985 4065516 ~ 4068749 (-)
G936199 stau2 other downstream 580067 3687773 ~ 3781667 (-)
G936144 NA other downstream 818415 3541428 ~ 3543319 (-)
G935247 NA other downstream 1697010 2664346 ~ 2664724 (-)
G937256 NA other upstream 664831 5041827 ~ 5042699 (-)
G938130 NA other upstream 1722394 6099390 ~ 6100232 (-)
G938277 NA other upstream 2088917 6465913 ~ 6466685 (-)
G938331 NA other upstream 2211447 6588443 ~ 6588817 (-)

Expression


LOC110536526(kcnb2) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.6.
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LOC110536526(kcnb2) Expression in each Bioproject

Bar chart with 12 bars.
LOC110536526(kcnb2) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 25.
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Co-expression Network