Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110536540 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 6659428 ~ 6675322 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: C-C chemokine receptor type 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110536540 | True | 731 | mRNA | 0.51 | 2 | 6659428 | 6675322 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536538 | LOC106579687 | coding | upstream | 178936 | 6379444 ~ 6480492 (+) |
| LOC110536537 | LOC106579698 | coding | upstream | 306077 | 6346007 ~ 6353351 (+) |
| LOC110535194 | LOC106579701 | coding | upstream | 338466 | 6297705 ~ 6320962 (+) |
| LOC110535195 | LOC106579699 | coding | upstream | 374721 | 6252982 ~ 6498275 (+) |
| LOC110535188 | LOC106579710 | coding | upstream | 511345 | 6141715 ~ 6148083 (+) |
| LOC110535201 | LOC106579689 | coding | downstream | 337026 | 7012348 ~ 7051408 (+) |
| LOC110535202 | LOC106579690 | coding | downstream | 695521 | 7370843 ~ 7427263 (+) |
| LOC110535203 | LOC106579691 | coding | downstream | 772092 | 7447414 ~ 7502456 (+) |
| LOC110536543 | LOC106579684 | coding | downstream | 1287687 | 7963009 ~ 7969001 (+) |
| LOC110535207 | LOC106579684 | coding | downstream | 1294605 | 7969927 ~ 7971811 (+) |
| G938358 | NA | non-coding | upstream | 41641 | 6614100 ~ 6617787 (+) |
| G938089 | NA | non-coding | upstream | 77561 | 6579964 ~ 6581867 (+) |
| G938069 | NA | non-coding | upstream | 110665 | 6548131 ~ 6548763 (+) |
| G938045 | NA | non-coding | upstream | 144841 | 6514231 ~ 6514587 (+) |
| G938038 | NA | non-coding | upstream | 155337 | 6502689 ~ 6504091 (+) |
| G938516 | NA | non-coding | downstream | 87382 | 6762704 ~ 6762904 (+) |
| G938531 | NA | non-coding | downstream | 96748 | 6772070 ~ 6773505 (+) |
| G938694 | NA | non-coding | downstream | 304232 | 6979554 ~ 6984573 (+) |
| G938732 | NA | non-coding | downstream | 356336 | 7031658 ~ 7035460 (+) |
| G937889 | NA | other | upstream | 537159 | 6121584 ~ 6122269 (+) |
| G937237 | NA | other | upstream | 1154099 | 5504704 ~ 5505329 (+) |
| G937096 | xkr9 | other | upstream | 1514863 | 5143317 ~ 5144565 (+) |
| G937051 | NA | other | upstream | 1631283 | 5019905 ~ 5028145 (+) |
| G935977 | NA | other | upstream | 2677230 | 3981851 ~ 3982198 (+) |
| G938723 | NA | other | downstream | 343829 | 7019151 ~ 7021424 (+) |
| G939408 | NA | other | downstream | 899030 | 7574352 ~ 7574909 (+) |
| G939544 | NA | other | downstream | 1145198 | 7820520 ~ 7823317 (+) |
| G939690 | NA | other | downstream | 1464944 | 8140266 ~ 8140583 (+) |
| LOC110535212 | LOC106579665 | other | downstream | 1521046 | 8195607 ~ 8379328 (+) |
