LOC110536601


Basic Information

Item Value
gene id LOC110536601
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 8171872 ~ 8174025 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034786.1
CCTTGATTACTTGCCCTATTTGTCACTCCCTTTGAcgtgtttcttattttgtattatgttgtgtttcttTATTAACACTTCCTCCCTGAACTTGCTCCCCGACGTTCAGATCACATCGTTACAGCCCAGCAGTGTGAGAATGGTGTGGTGTATGAGGTCTGTGTTCTCCCATCTGTCCCAGTGCAACCCAGAGCTCTGACTCCCAATGTGCCACCCACTCCTGTATGGAGAGCTGCTTCTGCACTGCAGGCAGAATGATGACCGCTCTCCAGGCCTGTTGTGAATGACGGCAGGTAAGCTAACAATGGCAGTGTCTCAATTCAGAGCTATTCCCTGCCCTCTGCCTTCATTCACAACGGGCCTGGAGAGCTGCCATCATTCACACTGGGCCTGGAGAGCTGCCATCATTCACACTGGGCCTGGAGAGCTGCCATCATTCACACTGGGCCTGGAGAGCTGCCATCATTCACACTGGGCCTGGCGAGCTGCCATCATTCACACTGGGCCTGGAGAGCTGCCATCATTCACACTGGGCCTGGAGAGCTGCCATCATTCACACTGGGCCTGGAGAGCTGCCATCATTCACACTGGGCCTGGAGAGCTGCCATCATTCACACTGGGCCTGGAGAGCGACTGGTTtatgcaggattttgttccaccTCAGCAGTAAGACACCTGGTTCAACAGATCATGGACTTCCATTAGggccaagGTGAAGGCTGTGTGgtgccctctctctgtccctgtgagTGGGAGGACTCTGTTCCCCCCCTACAGGTGAAGGCTGTGTGgtgccctctctctgtccctgtgagTGGGAGGACTCTTTCCCCCCCCTACAGGTGAAGGCTGTGTGGTGCCCTCTCATTTTATTAATTGTGTGAATAGGCTTTGTACTAGGTTCTATGGCTAGGTGAATGAATAGCAGGAATATTAACTTCGATGGTTCTGGTTAGGATTTGTCACTGTGTACCTGTAGGCGCTGTGTGTACCCGTAGGCGCTGTGTGTACCCGTAGGCGCTGTGTGTACCCGTAGGCGCTGTGTGTACCCGTAGGCACTGCAGTGTACCCGTAGGCACTGCAGTGTACTCGTAGGCGCTGTGTGTACCCGTAGGCACTGCAGTGTACTCGTAGGCGCTGTGTGTACCCGTAGGCGCTGTGTGTACCCGTAGGCACTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034786.1 True 1179 mRNA 0.54 3 8171872 8174025

Neighbor

gene id symbol gene type direction distance location
LOC110535207 LOC106579684 coding upstream 200061 7969927 ~ 7971811 (+)
LOC110536543 LOC106579684 coding upstream 202871 7963009 ~ 7969001 (+)
LOC110535203 LOC106579691 coding upstream 669416 7447414 ~ 7502456 (+)
LOC110535202 LOC106579690 coding upstream 744609 7370843 ~ 7427263 (+)
LOC110535201 LOC106579689 coding upstream 1120468 7012348 ~ 7051408 (+)
LOC118937436 NA coding downstream 768 8174793 ~ 8175785 (+)
LOC110535212 LOC106579665 coding downstream 21582 8195607 ~ 8379328 (+)
LOC118937462 NA coding downstream 120321 8294346 ~ 8337640 (+)
LOC110536544 LOC106590277 coding downstream 207345 8379847 ~ 8497020 (+)
LOC110535213 LOC106579667 coding downstream 476413 8650438 ~ 8685656 (+)
G939970 NA non-coding upstream 16256 8155402 ~ 8155616 (+)
G939686 NA non-coding upstream 41499 8130061 ~ 8130373 (+)
G939660 NA non-coding upstream 85535 8084736 ~ 8086337 (+)
G939597 LOC106603998 non-coding upstream 115983 8046947 ~ 8055889 (+)
G939635 NA non-coding upstream 130350 8041066 ~ 8041522 (+)
G940087 NA non-coding downstream 176357 8350382 ~ 8351339 (+)
G940105 NA non-coding downstream 213995 8388020 ~ 8388242 (+)
G940108 NA non-coding downstream 223547 8397572 ~ 8397803 (+)
G940110 NA non-coding downstream 227344 8401369 ~ 8401606 (+)
G940233 NA non-coding downstream 236093 8410118 ~ 8410328 (+)
G939690 NA other upstream 31289 8140266 ~ 8140583 (+)
G939544 NA other upstream 348555 7820520 ~ 7823317 (+)
G939408 NA other upstream 596963 7574352 ~ 7574909 (+)
G938723 NA other upstream 1150448 7019151 ~ 7021424 (+)
G937889 NA other upstream 2049603 6121584 ~ 6122269 (+)
G940102 NA other downstream 200481 8374506 ~ 8377928 (+)
G940247 NA other downstream 265455 8439480 ~ 8439775 (+)
G940313 NA other downstream 358515 8532540 ~ 8540867 (+)

Expression


Co-expression Network