LOC118937436


Basic Information

Item Value
gene id LOC118937436
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 8174793 ~ 8175785 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036936611.1
ataagtgtgtgaattggaccattttcctgtcctgctaagtattCGAAATGTgaagagtacttttgggtgtcagggaaaatcttctttaggaatgtagtaaagtacaATAAATCCCAAAAAACCTACTTAAGTTGTACTTTAGAGTGTTTTGACTTAAGTGCTTTTATTAGTTTTATATACTCTGTGTGTAGCTACCCTCTTCCAGCTCATGCACTGAGGGCATTTGGCAATGTGAGGCCTCCCCCtgcccccttcctctccctgtcaGGAGTCAGAGTTCCAGTAGGGGGGCGCTGCTCCCCGTGCCAGTAGGTGTGACAACGAGGATGACTGCGGTGACGGCTCTGACGAGCTATGCCCGGGGACGATTCTCCTgttccagactgtgccgactgaTCAGATGAGAAGTTCTGTCAGCCTGCCACCCCCATGCCCCTTTGCCCAAGTTCCAGTGTGGGGCGTTCCAGTGTGCCAGCCAGCCGTCTGCGCCGTCTGCCTGCCAGCCGGGGCGCCGTCTGTCAGCCGCCTGGACTGTGGCTTCACTGACGGTTTGACCGACAAGACTGTGTGGTGGGGGGAGTACCTGTGTTCAGGCGGCCGCTATGTGCTCTACCTCCACCGCTGTGATGGCCATGATGACCTGAGTGATGAGACGGGATGtgccgagagagagacacacataatGGAAGCGTTGAcgtactgtacagtgccttcggaaagtcgttctgcccctgaacaagacagttaacccactgctctctggtaggct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036936611.1 True 769 mRNA 0.53 2 8174793 8175785

Neighbor

gene id symbol gene type direction distance location
LOC110536601 NA coding upstream 768 8171872 ~ 8174025 (+)
LOC110535207 LOC106579684 coding upstream 202982 7969927 ~ 7971811 (+)
LOC110536543 LOC106579684 coding upstream 205792 7963009 ~ 7969001 (+)
LOC110535203 LOC106579691 coding upstream 672337 7447414 ~ 7502456 (+)
LOC110535202 LOC106579690 coding upstream 747530 7370843 ~ 7427263 (+)
LOC110535212 LOC106579665 coding downstream 19822 8195607 ~ 8379328 (+)
LOC118937462 NA coding downstream 118561 8294346 ~ 8337640 (+)
LOC110536544 LOC106590277 coding downstream 205585 8379847 ~ 8497020 (+)
LOC110535213 LOC106579667 coding downstream 474653 8650438 ~ 8685656 (+)
LOC110535219 NA coding downstream 623755 8799540 ~ 8802257 (+)
G939970 NA non-coding upstream 19177 8155402 ~ 8155616 (+)
G939686 NA non-coding upstream 44420 8130061 ~ 8130373 (+)
G939660 NA non-coding upstream 88456 8084736 ~ 8086337 (+)
G939597 LOC106603998 non-coding upstream 118904 8046947 ~ 8055889 (+)
G939635 NA non-coding upstream 133271 8041066 ~ 8041522 (+)
G940087 NA non-coding downstream 174597 8350382 ~ 8351339 (+)
G940105 NA non-coding downstream 212235 8388020 ~ 8388242 (+)
G940108 NA non-coding downstream 221787 8397572 ~ 8397803 (+)
G940110 NA non-coding downstream 225584 8401369 ~ 8401606 (+)
G940233 NA non-coding downstream 234333 8410118 ~ 8410328 (+)
G939690 NA other upstream 34210 8140266 ~ 8140583 (+)
G939544 NA other upstream 351476 7820520 ~ 7823317 (+)
G939408 NA other upstream 599884 7574352 ~ 7574909 (+)
G938723 NA other upstream 1153369 7019151 ~ 7021424 (+)
G937889 NA other upstream 2052524 6121584 ~ 6122269 (+)
G940102 NA other downstream 198721 8374506 ~ 8377928 (+)
G940247 NA other downstream 263695 8439480 ~ 8439775 (+)
G940313 NA other downstream 356755 8532540 ~ 8540867 (+)

Expression


Co-expression Network